SMTL ID : 8q9w.2 (1 other biounit)

Crystal structure of HsRNMT complexed with sinefungin and GMP-PnP

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.50 Å

Oligo State

monomer

Ligands

1 x SFG: SINEFUNGIN

SFG.1: 16 residues within 4Å: Chain A: K.16, G.41, C.42, G.43, D.63, I.64, A.96, D.97, S.98, S.99, Q.120, F.121, V.122, Y.125, M.136 Ligands: GNP.2 10 PLIP interactions: 10 interactions with chain A Hydrogen bonds: A:G.41, A:I.64, A:D.97, A:S.98, A:S.99, A:Q.120, A:F.121 Water bridges: A:G.45, A:Q.120 Salt bridges: A:K.16

1 x GNP: PHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTER

GNP.2: 11 residues within 4Å: Chain A: N.12, F.121, H.124, Y.125, P.155, F.196, L.198, V.201, E.206, Y.267 Ligands: SFG.1 6 PLIP interactions: 6 interactions with chain A Hydrogen bonds: A:N.12, A:H.124, A:Y.267, A:Y.267 Water bridges: A:R.9 Salt bridges: A:E.206

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Petit, A.P. et al., Structure-Guided Design of HsRNMT inhibitors. To Be Published

Release Date

2024-09-11

Peptides

mRNA cap guanine-N7 methyltransferase: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

mRNA cap guanine-N7 methyltransferase

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