SMTL ID : 8qyx.1

Human 60S ribosomal subunit

Coordinates
PDB Format
Method
ELECTRON MICROSCOPY
Oligo State
hetero-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-mer
Ligands
186 x MG: MAGNESIUM ION(Non-covalent)(Non-functional Binders)
7 x PUT: 1,4-DIAMINOBUTANE(Non-covalent)(Non-functional Binders)
46 x K: POTASSIUM ION(Non-covalent)(Non-functional Binders)
5 x ZN: ZINC ION(Non-covalent)
7 x SPD: SPERMIDINE(Non-functional Binders)(Non-covalent)
5 x SPM: SPERMINE(Non-functional Binders)(Non-covalent)
1 x ATP: ADENOSINE-5'-TRIPHOSPHATE(Non-covalent)
Links
RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP
Citation
Wiechert, F. et al., Visualizing the modification landscape of the human 60S ribosomal subunit at close to atomic resolution. Nucleic Acids Res. (2024)
Release Date
2024-12-11
Peptides
Large ribosomal subunit protein uL30: A
60S ribosomal protein L7a: B
60S ribosomal protein L9: C
Ribosomal protein uL16-like: D
60S ribosomal protein L11: E
60S ribosomal protein L13: F
60S ribosomal protein L14: G
60S ribosomal protein L15: H
60S ribosomal protein L13a: I
60S ribosomal protein L17: J
60S ribosomal protein L18: K
60S ribosomal protein L19: L
60S ribosomal protein L18a: M
60S ribosomal protein L21: N
60S ribosomal protein L22: O
60S ribosomal protein L23: P
60S ribosomal protein L24: Q
60S ribosomal protein L23a: R
60S ribosomal protein L26: S
60S ribosomal protein L27: T
Large ribosomal subunit protein uL15: U
60S ribosomal protein L29: V
60S ribosomal protein L30: W
60S ribosomal protein L31: X
60S ribosomal protein L32: Y
60S ribosomal protein L35a: Z
60S ribosomal protein L34: 0
60S ribosomal protein L35: 1
60S ribosomal protein L36: 2
60S ribosomal protein L37: 3
60S ribosomal protein L38: 4
60S ribosomal protein L39: 5
Large ribosomal subunit protein eL40: 6
60S ribosomal protein L36a: 7
60S ribosomal protein L37a: 8
60S ribosomal protein L28: 9
Large ribosomal subunit protein uL2: d
Large ribosomal subunit protein uL3: e
60S ribosomal protein L4: f
60S ribosomal protein L5: g
60S ribosomal protein L6: h
SMTL:PDB
SMTL Chain Id:
PDB Chain Id:
A
A1
B
B1
C
C1
D
D1
E
E1
F
F1
G
G1
H
H1
I
I1
J
J1
K
K1
L
L1
M
M1
N
N1
O
O1
P
P1
Q
Q1
R
R1
S
S1
T
T1
U
U1
V
V1
W
W1
X
X1
Y
Y1
Z
Z1
0
a1
1
b1
2
c1
3
d1
4
e1
5
f1
6
g1
7
i1
8
j1
9
k1
d
D2
e
E2
f
F2
g
G2
h
H2

Large ribosomal subunit protein uL30

60S ribosomal protein L7a

60S ribosomal protein L9

Ribosomal protein uL16-like

60S ribosomal protein L11

60S ribosomal protein L13

60S ribosomal protein L14

60S ribosomal protein L15

60S ribosomal protein L13a

60S ribosomal protein L17

60S ribosomal protein L18

60S ribosomal protein L19

60S ribosomal protein L18a

60S ribosomal protein L21

60S ribosomal protein L22

60S ribosomal protein L23

60S ribosomal protein L24

60S ribosomal protein L23a

60S ribosomal protein L26

60S ribosomal protein L27

Large ribosomal subunit protein uL15

60S ribosomal protein L29

60S ribosomal protein L30

60S ribosomal protein L31

60S ribosomal protein L32

60S ribosomal protein L35a

60S ribosomal protein L34

60S ribosomal protein L35

60S ribosomal protein L36

60S ribosomal protein L37

60S ribosomal protein L38

60S ribosomal protein L39

Large ribosomal subunit protein eL40

60S ribosomal protein L36a

60S ribosomal protein L37a

60S ribosomal protein L28

Large ribosomal subunit protein uL2

Large ribosomal subunit protein uL3

60S ribosomal protein L4

60S ribosomal protein L5

60S ribosomal protein L6

Related Entries With Identical Sequence

3j7o.1 | 3j7q.1 | 3j92.1 | 4d5y.1 | 4d67.1 | 4v5z.20 | 4v5z.21 | 4v5z.27 | 4v5z.29 | 4v5z.32 | 4v5z.34 | 4v5z.35 | 4v5z.36 | 4v5z.37 | 4v5z.38 | 4v5z.40 | 4v5z.41 | 4v5z.43 | 4v5z.44 | 4v5z.45 | 4v5z.46 | 4v5z.48 | 4xxb.1 | 5a8l.1 | 5aj0.2 | 5aj0.3 | 5aj0.4 | 5aj0.5 | 5aj0.6 | 5aj0.7  more...