SMTL ID : 8rc4.1

Structure of Integrator-PP2A complex

Coordinates

PDB Format Compare

Method

ELECTRON MICROSCOPY

Oligo State

hetero-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-mer

Ligands

2 x MN: MANGANESE (II) ION(Non-covalent)

MN.1: 4 residues within 4Å: Chain B: D.59, H.61, D.87 Ligands: MN.2 3 PLIP interactions: 3 interactions with chain B Metal complexes: B:D.59, B:H.61, B:D.87 MN.2: 6 residues within 4Å: Chain B: D.59, D.87, N.119, H.169, H.243 Ligands: MN.1 3 PLIP interactions: 3 interactions with chain B Metal complexes: B:D.87, B:H.169, B:H.243

2 x ZN: ZINC ION(Non-covalent)

ZN.3: 6 residues within 4Å: Chain L: H.70, D.74, H.75, D.180, H.416 Ligands: ZN.4 3 PLIP interactions: 3 interactions with chain L Metal complexes: L:H.75, L:D.180, L:H.416 ZN.4: 6 residues within 4Å: Chain L: H.70, H.72, H.75, H.159, D.180 Ligands: ZN.3 4 PLIP interactions: 4 interactions with chain L Metal complexes: L:H.70, L:H.72, L:H.159, L:D.180

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Fianu, I. et al., Structural basis of Integrator-dependent RNA polymerase II termination. Nature (2024)

Release Date

2024-02-07

Peptides

Serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A alpha isoform: A
Serine/threonine-protein phosphatase 2A catalytic subunit alpha isoform: B
DSS1: C
Integrator complex subunit 1: D
Integrator complex subunit 2: E
Integrator complex subunit 4: F
Integrator complex subunit 5: G
Integrator complex subunit 6: H
Integrator complex subunit 7: I
Integrator complex subunit 8: J
Integrator complex subunit 9: K
Integrator complex subunit 11: L
Integrator complex subunit 13: M
Integrator complex subunit 10: N
Integrator complex subunit 14: O
Integrator complex subunit 15: P

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
p

B
q

C
r

D
a

E
b

F
d

G
e

H
f

I
g

J
h

K
i

L
k

M
m

N
j

O
n

P
o

Serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A alpha isoform

Serine/threonine-protein phosphatase 2A catalytic subunit alpha isoform

DSS1

Integrator complex subunit 1

Integrator complex subunit 2

Integrator complex subunit 4

Integrator complex subunit 5

Integrator complex subunit 6

Integrator complex subunit 7

Integrator complex subunit 8

Integrator complex subunit 9

Integrator complex subunit 11

Integrator complex subunit 13

Integrator complex subunit 10

Integrator complex subunit 14

Integrator complex subunit 15

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