SMTL ID : 8rrg.1

Galectin-3 with a small molecule inhibitor

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.40 Å

Oligo State

monomer

Ligands

1 x 01: (2~{R},3~{R},4~{S},5~{R},6~{R})-6-[[1-[3-[bis(fluoranyl)methyl]oxetan-3-yl]-1,2,3-triazol-4-yl]methyl]-4-[4-[4-chloranyl-2,3-bis(fluoranyl)phenyl]-1,2,3-triazol-1-yl]-2-(hydroxymethyl)-5-methoxy-oxan-3-ol

01.1: 16 residues within 4Å: Chain A: R.32, I.33, A.34, H.46, N.48, R.50, V.60, N.62, W.69, G.70, R.71, E.72, S.125, G.126 Ligands: SCN.2, CL.3 12 PLIP interactions: 12 interactions with chain A Hydrogen bonds: A:H.46, A:R.50, A:N.62, A:E.72 Water bridges: A:R.32, A:H.46, A:R.50, A:W.69 pi-Stacking: A:H.46 pi-Cation interactions: A:R.32 Halogen bonds: A:N.48, A:W.69

1 x SCN: THIOCYANATE ION(Non-functional Binders)

SCN.2: 4 residues within 4Å: Chain A: R.32, N.48, R.50 Ligands: 01.1 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:R.32

1 x CL: CHLORIDE ION(Non-functional Binders)

CL.3: 5 residues within 4Å: Chain A: V.4, P.5, S.125, G.126 Ligands: 01.1 Ligand excluded by PLIP

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Remen, L. et al., Galectin-3 with a small molecule inhibitor. To Be Published

Release Date

2025-01-29

Peptides

Galectin-3: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Galectin-3

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