SMTL ID : 8s07.2 (1 other biounit)

A fragment-based inhibitor of SHP2

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.83 Å

Oligo State

monomer

Ligands

1 x DMS: DIMETHYL SULFOXIDE(Non-functional Binders)

DMS.1: 4 residues within 4Å: Chain A: S.392, A.394, Y.397, L.399 No protein-ligand interaction detected (PLIP)

1 x 01: 7-azanyl-N-pyridin-3-yl-3H-pyrrolo[3,2-b]pyridine-2-carboxamide

01.2: 16 residues within 4Å: Chain A: R.6, W.7, F.8, F.42, Y.64, L.75, A.76, S.110, W.249, F.252, E.253, Q.256, Q.257, E.259, C.260, E.509 19 PLIP interactions: 19 interactions with chain A Hydrophobic interactions: A:F.8, A:L.75, A:W.249, A:W.249, A:E.253, A:Q.256 Hydrogen bonds: A:R.6, A:Y.64, A:S.110, A:S.110, A:E.253, A:E.253, A:E.253, A:Q.256, A:E.259 Water bridges: A:L.75, A:E.509 pi-Stacking: A:F.8, A:F.252

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Day, J.E.H. et al., Fragment-Based Discovery of Allosteric Inhibitors of SH2 Domain-Containing Protein Tyrosine Phosphatase-2 (SHP2). J.Med.Chem. (2024)

Release Date

2024-03-20

Peptides

Tyrosine-protein phosphatase non-receptor type 11: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

Tyrosine-protein phosphatase non-receptor type 11

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