SMTL ID : 8s0o.1 (1 other biounit)

A fragment-based inhibitor of SHP2

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.83 Å

Oligo State

monomer

Ligands

1 x FMT: FORMIC ACID(Non-functional Binders)

FMT.1: 0 residues within 4Å: (No contacts) No protein-ligand interaction detected (PLIP)

1 x 01: 3-[4-chloranyl-2-(1H-pyrazol-4-ylmethyl)indazol-5-yl]-5-methyl-6-(piperazin-1-ylmethyl)-1H-pyrrolo[3,2-b]pyridine

01.2: 20 residues within 4Å: Chain A: T.109, S.110, E.111, R.112, F.114, H.115, L.217, N.218, T.219, T.220, E.250, E.251, T.254, L.255, Q.258, D.490, P.492, K.493, Q.496, M.497 15 PLIP interactions: 15 interactions with chain A Hydrophobic interactions: A:T.254, A:P.492, A:P.492, A:K.493, A:Q.496 Hydrogen bonds: A:R.112, A:F.114, A:E.251, A:L.255, A:K.493 Water bridges: A:T.219 pi-Cation interactions: A:R.112, A:R.112, A:K.493 Halogen bonds: A:T.254

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Day, J.E.H. et al., Fragment-Based Discovery of Allosteric Inhibitors of SH2 Domain-Containing Protein Tyrosine Phosphatase-2 (SHP2). J.Med.Chem. (2024)

Release Date

2024-03-20

Peptides

Tyrosine-protein phosphatase non-receptor type 11: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Tyrosine-protein phosphatase non-receptor type 11

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