SMTL ID : 8sgf.2 (1 other biounit)

KLHDC2 Kelch Domain with KLHDC2 c-terminal peptide bound

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.42 Å

Oligo State

hetero-1-1-mer

Ligands

2 x GOL: GLYCEROL(Non-functional Binders)

GOL.1: 3 residues within 4Å: Chain A: Y.62, P.64, S.90 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:S.90 Water bridges: A:Y.62, A:R.65, A:E.66 GOL.2: 3 residues within 4Å: Chain A: M.242, N.243, D.244 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:N.243, A:N.243, A:D.244

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Hickey, C.M. et al., Co-opting the E3 ligase KLHDC2 for targeted protein degradation by small molecules. Nat.Struct.Mol.Biol. (2024)

Release Date

2024-01-03

Peptides

Kelch domain-containing protein 2: A
HIS-SER-VAL-ASN-GLN-ARG-PHE-GLY-SER-ASN-ASN-THR-SER-GLY-SER: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

B
Y

Kelch domain-containing protein 2

HIS-SER-VAL-ASN-GLN-ARG-PHE-GLY-SER-ASN-ASN-THR-SER-GLY-SER

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