SMTL ID : 8sna.1

Cryo-EM structure of the human nucleosome core particle in complex with RNF168 and UbcH5c with backside ubiquitin (UbcH5c chemically conjugated to histone H2A) (class 2)

Coordinates
PDB Format
Method
ELECTRON MICROSCOPY
Oligo State
hetero-2-2-2-2-1-1-1-mer
Ligands
2 x ZN: ZINC ION(Non-covalent)
Links
RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP
Citation
Hu, Q. et al., Mechanisms of RNF168 nucleosome recognition and ubiquitylation. Mol.Cell (2024)
Release Date
2024-01-17
Peptides
Histone H3.1: AE
Histone H4: BF
Histone H2A type 1-B/E: CG
Histone H2B type 1-J: DH
E3 ubiquitin-protein ligase RNF168: K
Ubiquitin-conjugating enzyme E2 D3: L
Polyubiquitin-B: M
SMTL:PDB
SMTL Chain Id:
PDB Chain Id:
A
A
E
E
B
B
F
F
C
C
G
G
D
D
H
H
K
K
L
L
M
M

Histone H3.1

Toggle Identical (AE)

Histone H4

Histone H2A type 1-B/E

Histone H2B type 1-J

E3 ubiquitin-protein ligase RNF168

Ubiquitin-conjugating enzyme E2 D3

Polyubiquitin-B

Related Entries With Identical Sequence

7lya.1 | 7lyb.1 | 7lyc.1 | 8smw.1 | 8smx.1 | 8smy.1 | 8smz.1 | 8sn0.1 | 8sn1.1 | 8sn2.1 | 8sn3.1 | 8sn4.1 | 8sn5.1 | 8sn6.1 | 8sn7.1 | 8sn8.1 | 8sn9.1 | 8txv.1 | 8txw.1 | 8txx.1 | 8u13.1 | 8u14.1 | 8upf.1