SMTL ID : 8sp3.1

Asymmetric dimer of MapSPARTA bound with gRNA/tDNA hybrid

Coordinates

PDB Format Compare

Method

ELECTRON MICROSCOPY

Oligo State

hetero-2-2-mer

Ligands

2 x MG: MAGNESIUM ION(Non-covalent)

MG.1: 6 residues within 4Å: Chain B: K.263, N.468, I.507 Chain C: U.1, G.2, A.3 1 PLIP interactions: 1 interactions with chain B Metal complexes: B:I.507 MG.2: 4 residues within 4Å: Chain F: K.263, N.468, I.507 Chain G: U.1 No protein-ligand interaction detected (PLIP)

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Shen, Z. et al., Oligomerization-mediated activation of a short prokaryotic Argonaute. Nature (2023)

Release Date

2023-08-23

Peptides

TIR-APAZ: AE
short pAgo: BF

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

E
E

B
B

F
F

TIR-APAZ

short pAgo

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