SMTL ID : 8suy.1

Cryo-EM structure of the human cap binding complex (CBC)

Coordinates

PDB Format Compare

Method

ELECTRON MICROSCOPY

Oligo State

hetero-1-1-mer

Ligands

1 x M7G: 7N-METHYL-8-HYDROGUANOSINE-5'-DIPHOSPHATE

M7G.1: 11 residues within 4Å: Chain B: Y.20, D.22, Y.43, F.85, D.114, W.115, D.116, R.123, R.127, Q.133, V.134 12 PLIP interactions: 12 interactions with chain B Hydrogen bonds: B:Y.20, B:D.22, B:R.112, B:D.114, B:W.115, B:R.123, B:V.134 Salt bridges: B:D.114, B:D.116 pi-Stacking: B:Y.20, B:Y.43, B:Y.43

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Clarke, B.P. et al., Cryo-EM structure of the CBC-ALYREF complex. Elife (2024)

Release Date

2024-09-25

Peptides

Nuclear cap-binding protein subunit 1: A
Nuclear cap-binding protein subunit 2: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Nuclear cap-binding protein subunit 1

Nuclear cap-binding protein subunit 2

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