SMTL ID : 7abg.1

Human pre-Bact-1 spliceosome

Coordinates
PDB Format
Method
ELECTRON MICROSCOPY
Oligo State
hetero-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-2-2-2-2-2-2-2-1-1-mer
Ligands
1 x IHP: INOSITOL HEXAKISPHOSPHATE(Non-covalent)
1 x GTP: GUANOSINE-5'-TRIPHOSPHATE(Covalent)
1 x MG: MAGNESIUM ION(Non-covalent)
1 x GTG: 7-METHYL-GUANOSINE-5'-TRIPHOSPHATE-5'-GUANOSINE(Covalent)
Links
RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP
Citation
Townsend, C. et al., Mechanism of protein-guided folding of the active site U2/U6 RNA during spliceosome activation. Science (2020)
Release Date
2020-12-23
Peptides
Nuclear cap-binding protein subunit 1: A
U6 snRNA-associated Sm-like protein LSm7: B
Splicing factor 3B subunit 6: C
Splicing factor 3A subunit 2: D
U5 small nuclear ribonucleoprotein 40 kDa protein: E
U2 small nuclear ribonucleoprotein A': F
U2 small nuclear ribonucleoprotein B'': G
U5 small nuclear ribonucleoprotein 200 kDa helicase: H
Protein BUD31 homolog: I
Nuclear cap-binding protein subunit 2: J
Cell division cycle 5-like protein: L
Spliceosome-associated protein CWC15 homolog: M
U6 snRNA-associated Sm-like protein LSm2: N
U6 snRNA-associated Sm-like protein LSm3: O
U6 snRNA-associated Sm-like protein LSm4: P
U6 snRNA-associated Sm-like protein LSm5: Q
U6 snRNA-associated Sm-like protein LSm6: R
U6 snRNA-associated Sm-like protein LSm8: T
Microfibrillar-associated protein 1: U
PHD finger-like domain-containing protein 5A: V
Pleiotropic regulator 1: W
Pre-mRNA-processing-splicing factor 8: Y
Pre-mRNA-splicing factor 38A: Z
Pre-mRNA-splicing factor RBM22: 0
Splicing factor 3A subunit 1: 1
Splicing factor 3A subunit 3: 2
Transcription elongation regulator 1: 3
Splicing factor 3B subunit 1: 4
Splicing factor 3B subunit 2: 5
Splicing factor 3B subunit 3: 6
Splicing factor 3B subunit 4: 7
Splicing factor 3B subunit 5: 8
SNW domain-containing protein 1: 9
Smad nuclear-interacting protein 1: a
Zinc finger matrin-type protein 2: b
116 kDa U5 small nuclear ribonucleoprotein component: c
Serine/arginine repetitive matrix protein 1: d
Serine/arginine-rich splicing factor 1: f
Small nuclear ribonucleoprotein Sm D2: gp
Small nuclear ribonucleoprotein F: hs
Small nuclear ribonucleoprotein-associated proteins B and B': in
Small nuclear ribonucleoprotein Sm D3: jq
Small nuclear ribonucleoprotein G: kt
Small nuclear ribonucleoprotein E: lr
Small nuclear ribonucleoprotein Sm D1: mo
Ubiquitin-like protein 5: u
WW domain-binding protein 11: v
SMTL:PDB
SMTL Chain Id:
PDB Chain Id:
A
A5
B
A2
C
z
D
F
E
D
F
W
G
B
H
s
I
Q
J
A1
L
L
M
R
N
V
O
9
P
C
Q
H
R
J
T
A3
U
K
V
y
W
G
Y
A
Z
I
0
P
1
p
2
4
3
A4
4
u
5
T
6
E
7
w
8
x
9
v
a
0
b
N
c
r
d
Y
f
A6
g
h
p
a
h
i
s
b
i
m
n
f
j
l
q
e
k
k
t
d
l
j
r
c
m
n
o
g
u
q
v
X

Nuclear cap-binding protein subunit 1

U6 snRNA-associated Sm-like protein LSm7

Splicing factor 3B subunit 6

Splicing factor 3A subunit 2

U5 small nuclear ribonucleoprotein 40 kDa protein

U2 small nuclear ribonucleoprotein A'

U2 small nuclear ribonucleoprotein B''

U5 small nuclear ribonucleoprotein 200 kDa helicase

Protein BUD31 homolog

Nuclear cap-binding protein subunit 2

Cell division cycle 5-like protein

Spliceosome-associated protein CWC15 homolog

U6 snRNA-associated Sm-like protein LSm2

U6 snRNA-associated Sm-like protein LSm3

U6 snRNA-associated Sm-like protein LSm4

U6 snRNA-associated Sm-like protein LSm5

U6 snRNA-associated Sm-like protein LSm6

U6 snRNA-associated Sm-like protein LSm8

Microfibrillar-associated protein 1

PHD finger-like domain-containing protein 5A

Pleiotropic regulator 1

Pre-mRNA-processing-splicing factor 8

Pre-mRNA-splicing factor 38A

Pre-mRNA-splicing factor RBM22

Splicing factor 3A subunit 1

Splicing factor 3A subunit 3

Transcription elongation regulator 1

Splicing factor 3B subunit 1

Splicing factor 3B subunit 2

Splicing factor 3B subunit 3

Splicing factor 3B subunit 4

Splicing factor 3B subunit 5

SNW domain-containing protein 1

Smad nuclear-interacting protein 1

Zinc finger matrin-type protein 2

116 kDa U5 small nuclear ribonucleoprotein component

Serine/arginine repetitive matrix protein 1

Serine/arginine-rich splicing factor 1

Small nuclear ribonucleoprotein Sm D2

Small nuclear ribonucleoprotein F

Small nuclear ribonucleoprotein-associated proteins B and B'

Small nuclear ribonucleoprotein Sm D3

Small nuclear ribonucleoprotein G

Small nuclear ribonucleoprotein E

Small nuclear ribonucleoprotein Sm D1

Ubiquitin-like protein 5

WW domain-binding protein 11

Related Entries With Identical Sequence

1b34.1 | 1h2t.1 | 1h2u.1 | 1h2u.2 | 1h2v.1 | 1n52.1 | 1n54.1 | 2f9d.1 | 2f9d.2 | 3fex.1 | 3fex.2 | 3fey.1 | 4f7u.1 | 4f7u.2 | 4pjo.1 | 4pjo.2 | 4pjo.3 | 4pjo.4 | 4v98.1 | 4v98.2 | 4v98.3 | 4v98.4 | 4v98.5 | 4v98.6 | 4v98.7 | 4v98.8 | 4v98.9 | 4v98.10 | 4v98.11 | 4v98.12  more...