SMTL ID : 8tlz.1 (1 other biounit)

Preclinical Characterization of Pan-NKG2D Ligand-Binding NKG2D Receptor Decoys

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.75 Å

Oligo State

monomer

Ligands

1 x NAG- NAG- BMA: beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose

NAG-NAG-BMA.1: 7 residues within 4Å: Chain A: R.6, N.8, L.23, E.25, Q.91, I.93, Y.111 No protein-ligand interaction detected (PLIP)

1 x LMR: (2S)-2-hydroxybutanedioic acid(Non-covalent)

LMR.2: 8 residues within 4Å: Chain A: Y.7, D.65, L.66, R.94, M.160, D.163, C.164, E.167 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:R.94, A:M.160, A:C.164 Salt bridges: A:R.94

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Rupert, P.B. et al., Preclinical characterization of Pan-NKG2D ligand-binding NKG2D receptor decoys. Heliyon (2024)

Release Date

2024-04-17

Peptides

MHC class I polypeptide-related sequence A: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

MHC class I polypeptide-related sequence A

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