SMTL ID : 8trf.1 (1 other biounit)

Crystal structure of SM0281, an alpha/beta hydrolase from Sinorhizobium meliloti

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.46 Å

Oligo State

homo-dimer

Ligands

2 x PE3: 3,6,9,12,15,18,21,24,27,30,33,36,39-TRIDECAOXAHENTETRACONTANE-1,41-DIOL(Non-functional Binders)

PE3.1: 5 residues within 4Å: Chain A: A.19, A.21, R.22, D.93, R.98 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:R.98, A:R.98 Water bridges: A:D.90 PE3.2: 6 residues within 4Å: Chain A: E.166, R.174, L.177, I.201, E.202, R.205 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:E.202 Water bridges: A:E.202, A:E.202

2 x GOL: GLYCEROL(Non-functional Binders)

GOL.3: 5 residues within 4Å: Chain A: E.163, L.164, P.167, N.168, P.232 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:E.163, A:N.168 GOL.5: 5 residues within 4Å: Chain A: Y.233, T.234 Chain B: T.234, K.238, E.241 No protein-ligand interaction detected (PLIP)

1 x CL: CHLORIDE ION(Non-functional Binders)

CL.4: 2 residues within 4Å: Chain A: T.60, K.61 Ligand excluded by PLIP

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Lemak, S., Crystal structure of SM0281, an alpha/beta hydrolase from Sinorhizobium meliloti. To Be Published

Release Date

2025-02-12

Peptides

AB hydrolase-1 domain-containing protein: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

B
C

AB hydrolase-1 domain-containing protein

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