SMTL ID : 8trf.2 (1 other biounit)

Crystal structure of SM0281, an alpha/beta hydrolase from Sinorhizobium meliloti

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.46 Å

Oligo State

homo-dimer

Ligands

3 x GOL: GLYCEROL(Non-functional Binders)

GOL.1: 3 residues within 4Å: Chain A: A.72, D.274, T.278 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:D.274 GOL.4: 4 residues within 4Å: Chain A: E.166, R.198, I.201, R.205 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:R.198 GOL.5: 3 residues within 4Å: Chain A: Y.233, T.234 Chain B: E.241 3 PLIP interactions: 1 interactions with chain B, 2 interactions with chain A Hydrogen bonds: B:E.241, A:Y.233 Water bridges: A:Y.233

3 x PE3: 3,6,9,12,15,18,21,24,27,30,33,36,39-TRIDECAOXAHENTETRACONTANE-1,41-DIOL(Non-functional Binders)

PE3.2: 3 residues within 4Å: Chain A: E.163, P.167, R.205 1 PLIP interactions: 1 interactions with chain A Water bridges: A:R.174 PE3.3: 7 residues within 4Å: Chain A: R.92, S.176, R.180, Y.182, F.183, E.184, V.195 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:R.92, A:S.176, A:Y.182, A:E.184 PE3.6: 9 residues within 4Å: Chain A: F.160, L.164, N.168, T.170, E.173, E.185, F.196, D.230, V.231 No protein-ligand interaction detected (PLIP)

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Lemak, S., Crystal structure of SM0281, an alpha/beta hydrolase from Sinorhizobium meliloti. To Be Published

Release Date

2025-02-12

Peptides

AB hydrolase-1 domain-containing protein: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
D

AB hydrolase-1 domain-containing protein

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