SMTL ID : 8ttt.1

Structure of SNX27 FERM complexed with Fam21A repeat 15 (1124-1140)

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.35 Å

Oligo State

hetero-1-1-mer

Ligands

2 x GOL: GLYCEROL(Non-functional Binders)

GOL.1: 2 residues within 4Å: Chain A: M.207, F.251 No protein-ligand interaction detected (PLIP) GOL.2: 7 residues within 4Å: Chain A: F.61, V.62, Y.125, E.159, I.160, I.161, Y.242 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:V.62, A:I.161, A:Y.242, A:Y.242

2 x PEG: DI(HYDROXYETHYL)ETHER(Non-functional Binders)

PEG.3: 4 residues within 4Å: Chain A: K.122, Q.136, Y.139, Y.147 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:K.122, A:Q.136, A:Y.147 PEG.4: 4 residues within 4Å: Chain A: E.248, R.249, F.251, C.252 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:R.249

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Guo, Q. et al., Structural basis for coupling of the WASH subunit FAM21 with the endosomal SNX27-Retromer complex. Proc.Natl.Acad.Sci.USA (2024)

Release Date

2024-08-21

Peptides

Sorting nexin-27: A
Fam21A repeat 15 peptide: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Sorting nexin-27

Fam21A repeat 15 peptide

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