SMTL ID : 8ttu.1

Structure of SNX27 FERM complexed with Fam21A repeat 19 (1261 - 1274)

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.36 Å

Oligo State

hetero-1-1-mer

Ligands

2 x GOL: GLYCEROL(Non-functional Binders)

GOL.1: 8 residues within 4Å: Chain A: S.60, F.61, V.62, R.91, Y.125, E.159, I.160, I.161 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:V.62, A:E.159, A:I.161 GOL.2: 5 residues within 4Å: Chain A: K.127, E.159, I.161, H.187, L.195 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:K.127, A:K.127

2 x PEG: DI(HYDROXYETHYL)ETHER(Non-functional Binders)

PEG.3: 5 residues within 4Å: Chain A: V.118, K.122, Q.136, Y.139, Y.147 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:K.122, A:Y.139, A:Y.139, A:Y.147 PEG.4: 5 residues within 4Å: Chain A: D.211, T.212, D.213, E.214, E.215 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:E.214, A:E.215

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Guo, Q. et al., Structural basis for coupling of the WASH subunit FAM21 with the endosomal SNX27-Retromer complex. Proc.Natl.Acad.Sci.USA (2024)

Release Date

2024-08-21

Peptides

Sorting nexin-27: A
Fam21A repeat 19 peptide: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Sorting nexin-27

Fam21A repeat 19 peptide

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