SMTL ID : 8tw3.1 (1 other biounit)

hMPV fusion protein complexed with single domain antibodies sdHMPV16 and sdHMPV12

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.90 Å

Oligo State

hetero-1-1-1-mer

Ligands

2 x NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose(Non-covalent)(Post Translational Modification)

NAG.1: 4 residues within 4Å: Chain C: N.353, S.355, T.356, T.357 3 PLIP interactions: 3 interactions with chain C Hydrogen bonds: C:N.353, C:S.355, C:T.357 NAG.2: 7 residues within 4Å: Chain C: F.168, K.171, N.172, R.175, K.188, S.192, F.196 4 PLIP interactions: 4 interactions with chain C Hydrophobic interactions: C:F.168 Hydrogen bonds: C:K.171, C:K.171, C:R.175

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Ballegeer, M. et al., A neutralizing single-domain antibody that targets the trimer interface of the human metapneumovirus fusion protein. Mbio (2024)

Release Date

2024-01-24

Peptides

Single domain antibody sdHMPV12: A
Single domain antibody sdHMPV16: B
Fusion glycoprotein: C

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
F

Single domain antibody sdHMPV12

Single domain antibody sdHMPV16

Fusion glycoprotein

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