SMTL ID : 8tw3.2 (1 other biounit)

hMPV fusion protein complexed with single domain antibodies sdHMPV16 and sdHMPV12

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.90 Å

Oligo State

hetero-1-1-1-mer

Ligands

2 x NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose(Non-covalent)(Post Translational Modification)

NAG.1: 5 residues within 4Å: Chain A: E.26, N.353, S.355, T.356, T.357 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:N.353, A:T.356, A:T.357, A:T.357 NAG.2: 7 residues within 4Å: Chain A: F.168, K.171, N.172, K.188, M.189, S.192, F.196 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:K.171, A:K.171, A:N.172

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Ballegeer, M. et al., A neutralizing single-domain antibody that targets the trimer interface of the human metapneumovirus fusion protein. Mbio (2024)

Release Date

2024-01-24

Peptides

Fusion glycoprotein: A
Single domain antibody sdHMPV12: B
Single domain antibody sdHMPV16: C

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
X

B
Y

C
Z

Fusion glycoprotein

Single domain antibody sdHMPV12

Single domain antibody sdHMPV16

Related Entries With Identical Sequence