SMTL ID : 8uc4.1

Apo X-ray crystal structure of Cyclophilin D with a surface entropy reduction mutation (K175I)

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.87 Å

Oligo State

monomer

Ligands

2 x 15P: POLYETHYLENE GLYCOL (N=34)(Non-functional Binders)

15P.1: 3 residues within 4Å: Chain A: V.94, P.96, H.132 No protein-ligand interaction detected (PLIP) 15P.4: 4 residues within 4Å: Chain A: G.51, H.71, K.156, V.158 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:K.156

2 x PEG: DI(HYDROXYETHYL)ETHER(Non-functional Binders)

PEG.2: 3 residues within 4Å: Chain A: S.60, W.122 Ligands: NA.5 No protein-ligand interaction detected (PLIP) PEG.3: 4 residues within 4Å: Chain A: P.96, V.133, I.134, M.137 1 PLIP interactions: 1 interactions with chain A Water bridges: A:M.137

1 x NA: SODIUM ION(Non-functional Binders)

NA.5: 1 residues within 4Å: Ligands: PEG.2 No protein-ligand interaction detected (PLIP)

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Kreitler, D.F. et al., Apo X-ray crystal structure of Cyclophilin D with a surface entropy reduction mutation (K175I). To Be Published

Release Date

2024-08-07

Peptides

Peptidyl-prolyl cis-trans isomerase F, mitochondrial: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
X

Peptidyl-prolyl cis-trans isomerase F, mitochondrial

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