SMTL ID : 8uiu.1

Structure of an FMO from Bacillus niacini

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 3.14 Å

Oligo State

homo-trimer

Ligands

1 x FAD: FLAVIN-ADENINE DINUCLEOTIDE

FAD.1: 29 residues within 4Å: Chain A: V.36, G.37, A.38, G.39, P.40, A.41, G.42, L.59, E.60, Q.61, N.62, Y.69, R.70, G.71, E.72, I.73, Q.131, V.156, V.201, D.202, G.203, T.207, L.310, G.330, D.331, A.341, G.343, S.344, A.347 19 PLIP interactions: 19 interactions with chain A Hydrophobic interactions: A:Y.69, A:L.310 Hydrogen bonds: A:A.38, A:A.38, A:A.41, A:G.42, A:Q.61, A:N.62, A:R.70, A:E.72, A:I.73, A:I.73, A:Q.131, A:V.156, A:T.207, A:T.207, A:D.331, A:S.344, A:S.344

3 x DR9: 1-CIS-9-OCTADECANOYL-2-CIS-9-HEXADECANOYL PHOSPHATIDYL GLYCEROL

DR9.2: 23 residues within 4Å: Chain A: M.112, F.243, F.245, L.389, T.392, I.393, K.395, F.396, T.398, K.403, A.407, M.410, F.411, A.414, L.423, L.427, F.428 Chain C: I.402, I.406, L.409, S.412, I.413, K.416 23 PLIP interactions: 16 interactions with chain A, 7 interactions with chain C Hydrophobic interactions: A:F.243, A:F.243, A:F.245, A:T.392, A:I.393, A:K.395, A:F.396, A:F.396, A:T.398, A:K.403, A:A.407, A:F.411, A:L.423, A:L.427, A:F.428, C:I.402, C:I.406, C:L.409, C:I.413 Hydrogen bonds: A:T.392, C:S.412 Salt bridges: C:K.416, C:K.416 DR9.3: 25 residues within 4Å: Chain B: V.104, M.112, F.243, F.245, T.392, I.393, K.395, F.396, T.398, K.403, I.406, A.407, M.410, F.411, A.414, M.417, D.419, L.423, L.427, F.428 Chain C: K.403, M.410, A.414, M.417 Ligands: DR9.4 21 PLIP interactions: 19 interactions with chain B, 2 interactions with chain C Hydrophobic interactions: B:V.104, B:F.243, B:F.243, B:F.243, B:F.245, B:T.392, B:I.393, B:I.393, B:K.395, B:F.396, B:F.396, B:F.396, B:T.398, B:K.403, B:I.406, B:A.407, B:L.423, B:F.428, C:A.414 Hydrogen bonds: B:A.414 Salt bridges: C:K.403 DR9.4: 22 residues within 4Å: Chain B: F.396, K.403, M.410, I.413, A.414 Chain C: F.243, F.245, T.392, I.393, K.395, F.396, L.397, T.398, K.403, I.406, A.407, M.410, F.411, A.414, L.423, L.427 Ligands: DR9.3 21 PLIP interactions: 18 interactions with chain C, 3 interactions with chain B Hydrophobic interactions: C:F.243, C:F.243, C:F.245, C:T.392, C:I.393, C:K.395, C:F.396, C:F.396, C:L.397, C:T.398, C:K.403, C:I.406, C:A.407, C:F.411, C:F.411, C:A.414, C:L.423, C:L.427, B:F.396, B:I.413 Salt bridges: B:K.403

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Richardson, B.C. et al., Structural and Functional Characterization of a Novel Class A Flavin Monooxygenase from Bacillus niacini. Biochemistry (2024)

Release Date

2024-09-18

Peptides

Flavin monooxygenase: ABC

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
C

Flavin monooxygenase

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