SMTL ID : 8ukx.1

Crystal structure the extracellular region of the epidermal growth factor receptor variant III (EGFRvIII) at pH 7.0

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 3.30 Å

Oligo State

monomer

Ligands

1 x NAG- FUC: alpha-L-fucopyranose-(1-6)-2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)

NAG-FUC.1: 3 residues within 4Å: Chain A: A.217, L.218, N.237 3 PLIP interactions: 3 interactions with chain A Hydrophobic interactions: A:A.217, A:L.218 Hydrogen bonds: A:N.237

2 x NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)

NAG.2: 2 residues within 4Å: Chain A: P.41, N.70 No protein-ligand interaction detected (PLIP) NAG.3: 2 residues within 4Å: Chain A: M.276, N.277 No protein-ligand interaction detected (PLIP)

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Bagchi, A. et al., Structural insights into the role and targeting of EGFRvIII. Structure (2024)

Release Date

2024-06-12

Peptides

Epidermal growth factor receptor: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Epidermal growth factor receptor

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