SMTL ID : 8vrb.1

Structure of a synthetic antibody in complex with a class I MHC presenting a hapten-peptide conjugate

Coordinates

PDB Format Compare

Method

ELECTRON MICROSCOPY

Oligo State

hetero-1-1-1-1-1-mer

Ligands

1 x MOV: AMG 510 (bound form)

MOV.1: 22 residues within 4Å: Chain C: G.4, C.6 Chain D: Q.89, A.91, S.92, Y.93, K.96, T.97, I.98 Chain E: S.36, H.38, S.53, S.55, S.60, S.62, G.102, G.103, W.104, I.105, A.106, A.107, M.108 7 PLIP interactions: 3 interactions with chain E, 4 interactions with chain D Hydrogen bonds: E:S.62, E:G.103 pi-Cation interactions: E:H.38 Hydrophobic interactions: D:A.91, D:Y.93, D:I.98, D:I.98

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Maso, L. et al., Molecular basis for antibody recognition of multiple drug-peptide/MHC complexes. Proc.Natl.Acad.Sci.USA (2024)

Release Date

2024-09-04

Peptides

HLA-A antigen: A
Beta-2-microglobulin: B
GTPase KRas, N-terminally processed: C
R023 Fab light chain: D
R023 Fab heavy chain: E

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
C

D
D

E
E

HLA-A antigen

Beta-2-microglobulin

GTPase KRas, N-terminally processed

R023 Fab light chain

R023 Fab heavy chain

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