SMTL ID : 8wsr.1

the structure of BtSY1_RBD/hACE2 protein

Coordinates

PDB Format Compare

Method

ELECTRON MICROSCOPY

Oligo State

hetero-1-1-mer

Ligands

1 x NAG- NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)

NAG-NAG.1: 4 residues within 4Å: Chain B: S.420, D.543, S.545, N.546 No protein-ligand interaction detected (PLIP)

5 x NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)

NAG.2: 4 residues within 4Å: Chain B: Q.81, N.103, S.106, V.107 2 PLIP interactions: 2 interactions with chain B Hydrophobic interactions: B:V.107 Hydrogen bonds: B:Q.81 NAG.3: 3 residues within 4Å: Chain B: N.53, T.55, Q.340 1 PLIP interactions: 1 interactions with chain B Hydrogen bonds: B:N.53 NAG.4: 2 residues within 4Å: Chain B: K.26, N.90 1 PLIP interactions: 1 interactions with chain B Hydrogen bonds: B:K.26 NAG.6: 2 residues within 4Å: Chain B: N.432, W.594 1 PLIP interactions: 1 interactions with chain B Hydrogen bonds: B:N.432 NAG.7: 3 residues within 4Å: Chain B: V.316, P.321, N.322 No protein-ligand interaction detected (PLIP)

1 x ZN: ZINC ION(Non-covalent)

ZN.5: 3 residues within 4Å: Chain B: H.374, H.378, E.402 3 PLIP interactions: 3 interactions with chain B Metal complexes: B:H.374, B:H.378, B:E.402

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Xu, Z.P. et al., the structure of bsAb3_Gn_Gc complex. To Be Published

Release Date

2024-10-23

Peptides

Spike protein S1: A
Angiotensin-converting enzyme 2: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
C

B
A

Spike protein S1

Angiotensin-converting enzyme 2

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