SMTL ID : 8wtn.1

Cryo-EM structure of jasmonic acid transporter ABCG16 in occluded conformation

Coordinates

PDB Format Compare

Method

ELECTRON MICROSCOPY

Oligo State

homo-dimer

Ligands

2 x ADP: ADENOSINE-5'-DIPHOSPHATE(Covalent)

ADP.1: 10 residues within 4Å: Chain A: L.107, A.126, S.127, G.128, S.129, G.130, K.131, S.132, T.133 Ligands: VO4.2 8 PLIP interactions: 8 interactions with chain A Hydrogen bonds: A:A.126, A:G.128, A:S.129, A:G.130, A:K.131, A:S.132, A:T.133 Salt bridges: A:K.131 ADP.3: 10 residues within 4Å: Chain B: L.107, A.126, S.127, G.128, S.129, G.130, K.131, S.132, T.133 Ligands: VO4.4 8 PLIP interactions: 8 interactions with chain B Hydrogen bonds: B:A.126, B:G.128, B:S.129, B:G.130, B:K.131, B:S.132, B:T.133 Salt bridges: B:K.131

2 x VO4: VANADATE ION(Non-covalent)

VO4.2: 8 residues within 4Å: Chain A: A.126, S.127, G.128, K.131, S.132, E.257, H.289 Ligands: ADP.1 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:K.131, A:S.132, A:H.289 VO4.4: 8 residues within 4Å: Chain B: A.126, S.127, G.128, K.131, S.132, E.257, H.289 Ligands: ADP.3 3 PLIP interactions: 3 interactions with chain B Hydrogen bonds: B:K.131, B:S.132, B:H.289

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

An, N. et al., Cryo-EM structure and molecular mechanism of the jasmonic acid transporter ABCG16. Nat.Plants (2024)

Release Date

2024-10-23

Peptides

ABC transporter G family member 16: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Membrane

We predict this structure to be a membrane protein.
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ABC transporter G family member 16

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