SMTL ID : 8wv4.1

C-reactive protein, pentamer

Coordinates

PDB Format Compare

Method

ELECTRON MICROSCOPY

Oligo State

homo-pentamer

Ligands

10 x CA: CALCIUM ION(Non-covalent)

CA.1: 4 residues within 4Å: Chain A: E.156, D.158, E.165, Q.168 5 PLIP interactions: 5 interactions with chain A Metal complexes: A:E.156, A:D.158, A:D.158, A:E.165, A:E.165 CA.2: 5 residues within 4Å: Chain A: D.78, N.79, E.156, Q.157, D.158 5 PLIP interactions: 5 interactions with chain A Metal complexes: A:D.78, A:D.78, A:E.156, A:Q.157, A:D.158 CA.3: 4 residues within 4Å: Chain B: E.156, D.158, E.165, Q.168 5 PLIP interactions: 5 interactions with chain B Metal complexes: B:E.156, B:D.158, B:D.158, B:E.165, B:E.165 CA.4: 5 residues within 4Å: Chain B: D.78, N.79, E.156, Q.157, D.158 5 PLIP interactions: 5 interactions with chain B Metal complexes: B:D.78, B:D.78, B:E.156, B:Q.157, B:D.158 CA.5: 4 residues within 4Å: Chain C: E.156, D.158, E.165, Q.168 5 PLIP interactions: 5 interactions with chain C Metal complexes: C:E.156, C:D.158, C:D.158, C:E.165, C:E.165 CA.6: 5 residues within 4Å: Chain C: D.78, N.79, E.156, Q.157, D.158 5 PLIP interactions: 5 interactions with chain C Metal complexes: C:D.78, C:D.78, C:E.156, C:Q.157, C:D.158 CA.7: 4 residues within 4Å: Chain D: E.156, D.158, E.165, Q.168 5 PLIP interactions: 5 interactions with chain D Metal complexes: D:E.156, D:D.158, D:D.158, D:E.165, D:E.165 CA.8: 5 residues within 4Å: Chain D: D.78, N.79, E.156, Q.157, D.158 5 PLIP interactions: 5 interactions with chain D Metal complexes: D:D.78, D:D.78, D:E.156, D:Q.157, D:D.158 CA.9: 4 residues within 4Å: Chain E: E.156, D.158, E.165, Q.168 5 PLIP interactions: 5 interactions with chain E Metal complexes: E:E.156, E:D.158, E:D.158, E:E.165, E:E.165 CA.10: 5 residues within 4Å: Chain E: D.78, N.79, E.156, Q.157, D.158 5 PLIP interactions: 5 interactions with chain E Metal complexes: E:D.78, E:D.78, E:E.156, E:Q.157, E:D.158

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Yadav, S. et al., Factors affecting macromolecule orientations in thin films formed in cryo-EM. Acta Crystallogr D Struct Biol (2024)

Release Date

2024-07-17

Peptides

C-reactive protein(1-205): ABCDE

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
C

D
D

E
E

C-reactive protein(1-205)

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