SMTL ID : 8x0x.2 (1 other biounit)

Crystal structure of JE-5C in complex with SARS-CoV-2 RBD

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 3.45 Å

Oligo State

hetero-1-1-1-mer

Ligands

1 x NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)

NAG.1: 3 residues within 4Å: Chain A: G.6, N.10, S.38 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:N.10, A:S.38

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Chen, X. et al., The presence of broadly neutralizing anti-SARS-CoV-2 RBD antibodies elicited by primary series and booster dose of COVID-19 vaccine. Plos Pathog. (2024)

Release Date

2024-06-05

Peptides

Spike protein S1: A
Heavy chain of JE-5C Fab: B
Light chain of JE-5C Fab: C

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
G

C
K

Spike protein S1

Heavy chain of JE-5C Fab

Light chain of JE-5C Fab

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