SMTL ID : 8x6z.1

1-naphthylamine GS from Pseudomonas sp. JS3066

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.95 Å

Oligo State

homo-hexamer

Ligands

10 x MN: MANGANESE (II) ION(Non-covalent)

MN.1: 3 residues within 4Å: Chain A: E.177, H.306, E.396 3 PLIP interactions: 3 interactions with chain A Metal complexes: A:E.177, A:H.306, A:E.396 MN.2: 3 residues within 4Å: Chain A: E.179, E.249, E.256 4 PLIP interactions: 3 interactions with chain A, 1 Ligand-Water interactions Metal complexes: A:E.179, A:E.249, A:E.256, H2O.2 MN.3: 3 residues within 4Å: Chain B: E.179, E.249, E.256 4 PLIP interactions: 3 interactions with chain B, 1 Ligand-Water interactions Metal complexes: B:E.179, B:E.249, B:E.256, H2O.7 MN.4: 3 residues within 4Å: Chain B: E.177, H.306, E.396 3 PLIP interactions: 3 interactions with chain B Metal complexes: B:E.177, B:H.306, B:E.396 MN.5: 3 residues within 4Å: Chain C: E.179, E.249, E.256 4 PLIP interactions: 3 interactions with chain C, 1 Ligand-Water interactions Metal complexes: C:E.179, C:E.249, C:E.256, H2O.11 MN.6: 3 residues within 4Å: Chain D: E.179, E.249, E.256 5 PLIP interactions: 4 interactions with chain D, 1 Ligand-Water interactions Metal complexes: D:E.179, D:E.249, D:E.256, D:E.256, H2O.15 MN.7: 3 residues within 4Å: Chain E: E.177, H.306, E.396 3 PLIP interactions: 3 interactions with chain E Metal complexes: E:E.177, E:H.306, E:E.396 MN.8: 3 residues within 4Å: Chain E: E.179, E.249, E.256 5 PLIP interactions: 4 interactions with chain E, 1 Ligand-Water interactions Metal complexes: E:E.179, E:E.249, E:E.256, E:E.256, H2O.21 MN.9: 3 residues within 4Å: Chain F: E.177, H.306, E.396 2 PLIP interactions: 2 interactions with chain F Metal complexes: F:E.177, F:E.396 MN.10: 3 residues within 4Å: Chain F: E.179, E.249, E.256 3 PLIP interactions: 3 interactions with chain F Metal complexes: F:E.179, F:E.249, F:E.256

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Zhou, N.Y. et al., Structure of 1-naphthylamine glutamine synthetase at 2.95 Angstroms resolution. To Be Published

Release Date

2024-01-03

Peptides

Glutamine synthetase: ABCDEF

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
C

D
D

E
E

F
F

Glutamine synthetase

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