SMTL ID : 8xd7.1

Cryo-EM structure of inhibitor 25a bound human urea transporter A2.

Coordinates

PDB Format Compare

Method

ELECTRON MICROSCOPY

Oligo State

homo-trimer

Ligands

6 x 01: N-(4-acetamidophenyl)-5-ethanoyl-furan-2-carboxamide

01.1: 13 residues within 4Å: Chain A: L.131, F.135, F.179, L.202, Q.231, V.232, G.234, L.284, F.287, P.335, P.336, C.337, T.338 7 PLIP interactions: 7 interactions with chain A Hydrophobic interactions: A:L.131, A:L.131, A:L.202, A:L.284, A:P.335, A:P.336 Hydrogen bonds: A:Q.231 01.2: 10 residues within 4Å: Chain A: Q.67, V.68, F.70, F.120, Y.123, P.173, F.175, T.176, F.341, L.363 7 PLIP interactions: 7 interactions with chain A Hydrophobic interactions: A:F.70, A:Y.123, A:L.363 Hydrogen bonds: A:Q.67, A:T.176, A:L.363 pi-Stacking: A:F.120 01.3: 13 residues within 4Å: Chain B: L.131, F.135, F.179, L.202, Q.231, V.232, G.234, L.284, F.287, P.335, P.336, C.337, T.338 7 PLIP interactions: 7 interactions with chain B Hydrophobic interactions: B:L.131, B:L.131, B:L.202, B:L.284, B:P.335, B:P.336 Hydrogen bonds: B:Q.231 01.4: 10 residues within 4Å: Chain B: Q.67, V.68, F.70, F.120, Y.123, P.173, F.175, T.176, F.341, L.363 7 PLIP interactions: 7 interactions with chain B Hydrophobic interactions: B:F.70, B:Y.123, B:L.363 Hydrogen bonds: B:Q.67, B:T.176, B:L.363 pi-Stacking: B:F.120 01.5: 13 residues within 4Å: Chain C: L.131, F.135, F.179, L.202, Q.231, V.232, G.234, L.284, F.287, P.335, P.336, C.337, T.338 7 PLIP interactions: 7 interactions with chain C Hydrophobic interactions: C:L.131, C:L.131, C:L.202, C:L.284, C:P.335, C:P.336 Hydrogen bonds: C:Q.231 01.6: 10 residues within 4Å: Chain C: Q.67, V.68, F.70, F.120, Y.123, P.173, F.175, T.176, F.341, L.363 7 PLIP interactions: 7 interactions with chain C Hydrophobic interactions: C:F.70, C:Y.123, C:L.363 Hydrogen bonds: C:Q.67, C:T.176, C:L.363 pi-Stacking: C:F.120

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Huang, S.M. et al., Structural insights into the mechanisms of urea permeation and distinct inhibition modes of urea transporters. Nat Commun (2024)

Release Date

2024-12-04

Peptides

Urea transporter 2: ABC

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
C

Membrane

We predict this structure to be a membrane protein.
Show / Hide

Urea transporter 2

Related Entries With Identical Sequence