SMTL ID : 8xdc.1

Cryo-EM structure of human urea transporter A2.

Coordinates

PDB Format Compare

Method

ELECTRON MICROSCOPY

Oligo State

homo-trimer

Ligands

3 x 01: N-[3-[1,1-bis(oxidanylidene)-1,2-thiazolidin-2-yl]-4-chloranyl-phenyl]-2-methoxy-5-methyl-benzenesulfonamide

01.1: 13 residues within 4Å: Chain A: Q.67, F.70, A.115, F.120, Y.123, S.160, P.173, V.174, F.175, M.299, F.300, L.363, V.366 8 PLIP interactions: 8 interactions with chain A Hydrophobic interactions: A:F.120, A:F.120, A:F.120, A:Y.123, A:V.366 Hydrogen bonds: A:Y.123, A:V.174 pi-Stacking: A:F.300 01.2: 13 residues within 4Å: Chain B: Q.67, F.70, A.115, F.120, Y.123, S.160, P.173, V.174, F.175, M.299, F.300, L.363, V.366 8 PLIP interactions: 8 interactions with chain B Hydrophobic interactions: B:F.120, B:F.120, B:F.120, B:Y.123, B:V.366 Hydrogen bonds: B:Y.123, B:V.174 pi-Stacking: B:F.300 01.3: 13 residues within 4Å: Chain C: Q.67, F.70, A.115, F.120, Y.123, S.160, P.173, V.174, F.175, M.299, F.300, L.363, V.366 8 PLIP interactions: 8 interactions with chain C Hydrophobic interactions: C:F.120, C:F.120, C:F.120, C:Y.123, C:V.366 Hydrogen bonds: C:Y.123, C:V.174 pi-Stacking: C:F.300

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Huang, S.M. et al., Structural insights into the mechanisms of urea permeation and distinct inhibition modes of urea transporters. Nat Commun (2024)

Release Date

2024-12-04

Peptides

Urea transporter 2: ABC

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
C

Membrane

We predict this structure to be a membrane protein.
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Urea transporter 2

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