SMTL ID : 8xkl.1

Structure of ACPII-CCPII from cryptophyte algae

Coordinates

PDB Format Compare

Method

ELECTRON MICROSCOPY

Oligo State

hetero-1-1-1-1-1-1-1-1-mer

Ligands

69 x CLA: CHLOROPHYLL A(Non-covalent)

CLA.1: 9 residues within 4Å: Chain A: Q.53, A.54, I.55, P.56, V.72, F.74 Ligands: CLA.2, II0.16, IHT.17 5 PLIP interactions: 5 interactions with chain A, Hydrophobic interactions: A:A.54, A:I.55, A:P.56, A:F.74 Metal complexes: A:A.54 CLA.2: 23 residues within 4Å: Chain A: L.64, V.69, G.70, D.71, V.72, G.73, F.74, D.75, F.79, M.85, L.88, R.89, A.91, E.92, H.95, R.197, M.200, I.201 Ligands: CLA.1, CLA.3, II0.15, II0.16, IHT.17 19 PLIP interactions: 19 interactions with chain A, Hydrophobic interactions: A:V.72, A:F.74, A:F.79, A:L.88, A:L.88, A:A.91, A:H.95, A:R.197, A:R.197, A:I.201 Hydrogen bonds: A:V.72, A:G.73, A:F.74, A:D.75, A:R.197 Salt bridges: A:R.89 pi-Cation interactions: A:R.197, A:R.197 Metal complexes: A:E.92 CLA.3: 12 residues within 4Å: Chain A: F.79, I.83, W.87, L.88, H.95 Ligands: CLA.2, CLA.6, CLA.7, CLA.12, II0.15, IHT.17, LMG.18 4 PLIP interactions: 4 interactions with chain A, Hydrophobic interactions: A:F.79 pi-Stacking: A:H.95, A:H.95 Metal complexes: A:H.95 CLA.4: 15 residues within 4Å: Chain A: L.101, A.102, G.105, V.108, Q.109, A.112, L.113, F.114, V.117, F.121, L.129, S.138 Ligands: CLA.13, II0.15, II0.91 7 PLIP interactions: 7 interactions with chain A, Hydrophobic interactions: A:L.101, A:V.108, A:F.114, A:F.114, A:F.121, A:L.129 Hydrogen bonds: A:F.114 CLA.5: 13 residues within 4Å: Chain A: Q.136, G.137, S.138, Q.141, L.142, W.145 Chain G: F.206, P.208, I.209, F.212 Ligands: II0.19, II0.91, CLA.103 9 PLIP interactions: 6 interactions with chain A, 3 interactions with chain G, Hydrophobic interactions: A:L.142, A:W.145, A:W.145, A:W.145, G:F.206, G:I.209 Hydrogen bonds: A:Q.136, G:I.209 pi-Stacking: A:W.145 CLA.6: 12 residues within 4Å: Chain A: H.130, V.134, M.139, Q.140, L.142, L.143 Ligands: CLA.3, CLA.7, CLA.12, II0.15, IHT.17, LMG.18 6 PLIP interactions: 6 interactions with chain A, Hydrophobic interactions: A:V.134, A:M.139, A:L.142, A:L.143 pi-Cation interactions: A:H.130, A:H.130 CLA.7: 16 residues within 4Å: Chain A: W.87, E.90, A.91, K.94, H.95, L.143, L.146, G.147, E.150, F.154, I.157 Ligands: CLA.3, CLA.6, LMG.18, CLA.66, II0.91 11 PLIP interactions: 11 interactions with chain A, Hydrophobic interactions: A:W.87, A:K.94, A:L.146, A:E.150, A:E.150, A:F.154, A:I.157 Salt bridges: A:K.94 pi-Cation interactions: A:K.94, A:K.94 Metal complexes: A:E.150 CLA.8: 21 residues within 4Å: Chain A: R.97, M.100, L.101, T.104, G.169, D.170, F.171, G.172, F.173, D.174, C.178, G.179, R.188, Q.189, V.191, E.192 Chain G: V.32, F.33 Ligands: KC2.10, IHT.14, II0.91 17 PLIP interactions: 17 interactions with chain A, Hydrophobic interactions: A:R.97, A:R.97, A:M.100, A:L.101, A:T.104, A:F.171, A:F.173, A:R.188, A:Q.189, A:V.191 Hydrogen bonds: A:D.170, A:F.171, A:F.173 Salt bridges: A:R.97, A:R.188 pi-Cation interactions: A:R.97, A:R.97 CLA.9: 7 residues within 4Å: Chain A: R.187, L.190, V.191, K.194, N.195 Ligands: KC2.10, II0.16 5 PLIP interactions: 5 interactions with chain A, Hydrophobic interactions: A:K.194, A:K.194 Hydrogen bonds: A:N.195 Salt bridges: A:R.187 pi-Cation interactions: A:K.194 CLA.11: 10 residues within 4Å: Chain A: I.201, G.204, G.205, H.208, H.209, L.212, F.220 Ligands: IHT.14, II0.16, IHT.17 3 PLIP interactions: 3 interactions with chain A, Hydrophobic interactions: A:F.220 pi-Stacking: A:H.209 Metal complexes: A:H.209 CLA.12: 6 residues within 4Å: Chain A: H.208, F.211 Ligands: CLA.3, CLA.6, II0.16, IHT.17 3 PLIP interactions: 3 interactions with chain A, Hydrophobic interactions: A:F.211, A:F.211 pi-Stacking: A:H.208 CLA.13: 11 residues within 4Å: Chain A: F.114, P.115, G.116, V.117, T.120, F.121, Q.136 Chain G: F.212, P.213 Ligands: CLA.4, II0.91 7 PLIP interactions: 7 interactions with chain A, Hydrophobic interactions: A:F.114, A:F.114, A:F.114, A:V.117, A:T.120, A:F.121 Metal complexes: A:P.115 CLA.20: 8 residues within 4Å: Chain B: V.52, A.54, I.55, P.56, V.72, F.74 Ligands: II0.35, IHT.37 3 PLIP interactions: 3 interactions with chain B, Hydrophobic interactions: B:A.54, B:P.56, B:F.74 CLA.21: 20 residues within 4Å: Chain B: L.64, V.69, G.70, D.71, V.72, G.73, F.74, D.75, F.79, A.88, R.89, A.91, E.92, H.95, R.198, M.201, I.202 Ligands: CLA.22, II3.34, II0.35 18 PLIP interactions: 18 interactions with chain B, Hydrophobic interactions: B:V.72, B:F.74, B:F.79, B:F.79, B:F.79, B:A.88, B:A.91, B:R.198, B:I.202 Hydrogen bonds: B:D.71, B:V.72, B:G.73, B:F.74, B:R.198 Salt bridges: B:R.89 pi-Cation interactions: B:R.198, B:R.198 Metal complexes: B:E.92 CLA.22: 11 residues within 4Å: Chain B: W.82, L.83, W.87, A.91, H.95 Ligands: CLA.21, CLA.25, CLA.26, CLA.31, II3.34, IHT.37 3 PLIP interactions: 3 interactions with chain B, Hydrophobic interactions: B:W.82, B:A.91 Metal complexes: B:H.95 CLA.23: 16 residues within 4Å: Chain B: V.98, L.101, A.102, T.104, G.105, V.108, Q.109, Y.112, K.113, F.114, F.117, F.121, L.129 Ligands: CLA.24, II3.34, II0.36 8 PLIP interactions: 8 interactions with chain B, Hydrophobic interactions: B:L.101, B:A.102, B:V.108, B:Y.112, B:F.114, B:F.114 Hydrogen bonds: B:F.114 Salt bridges: B:K.113 CLA.24: 14 residues within 4Å: Chain B: F.117, Q.136, G.137, A.138, Q.141, L.142, W.145 Chain C: F.213, S.215, L.216 Ligands: CLA.23, II0.36, II0.38, CLA.49 11 PLIP interactions: 9 interactions with chain B, 2 interactions with chain C, Hydrophobic interactions: B:A.138, B:Q.141, B:L.142, B:L.142, B:W.145, B:W.145, B:W.145, C:F.213 Hydrogen bonds: B:Q.136, C:L.216 pi-Stacking: B:W.145 CLA.25: 10 residues within 4Å: Chain B: H.130, N.131, V.134, M.139, Q.140, L.142, L.143 Ligands: CLA.22, II3.34, IHT.37 7 PLIP interactions: 7 interactions with chain B, Hydrophobic interactions: B:V.134, B:L.142, B:L.143 Salt bridges: B:H.130 pi-Stacking: B:H.130, B:H.130 Metal complexes: B:H.130 CLA.26: 13 residues within 4Å: Chain B: W.87, E.90, A.91, K.94, H.95, L.146, G.147, E.150, I.151, V.155, I.158 Ligands: CLA.22, II0.36 7 PLIP interactions: 7 interactions with chain B, Hydrophobic interactions: B:W.87, B:K.94, B:L.146, B:E.150, B:I.151, B:V.155 Salt bridges: B:K.94 CLA.27: 16 residues within 4Å: Chain B: R.97, M.100, L.101, G.170, D.171, F.172, G.173, F.174, C.179, G.180, R.189, Q.190, E.193 Ligands: KC2.29, II0.33, II0.36 16 PLIP interactions: 16 interactions with chain B, Hydrophobic interactions: B:R.97, B:R.97, B:M.100, B:L.101, B:F.174, B:R.189, B:Q.190, B:E.193 Hydrogen bonds: B:R.97, B:D.171, B:F.172, B:F.174 Salt bridges: B:R.189 pi-Cation interactions: B:R.97, B:R.97 Metal complexes: B:E.193 CLA.28: 9 residues within 4Å: Chain B: Y.42, I.47, R.188, L.191, T.192, K.195, N.196 Ligands: KC2.29, II0.35 5 PLIP interactions: 5 interactions with chain B, Hydrophobic interactions: B:I.47, B:K.195 Salt bridges: B:R.188 pi-Cation interactions: B:K.195, B:K.195 CLA.30: 14 residues within 4Å: Chain B: I.202, G.206, H.209, H.210, L.213, V.214, F.221, I.225, N.227 Ligands: CLA.31, CLA.32, II0.33, II0.35, IHT.37 6 PLIP interactions: 6 interactions with chain B, Hydrophobic interactions: B:I.202, B:L.213, B:F.221, B:F.221 pi-Stacking: B:H.210 Metal complexes: B:H.210 CLA.31: 7 residues within 4Å: Chain B: H.209, L.212, L.213 Ligands: CLA.22, CLA.30, II0.35, IHT.37 2 PLIP interactions: 2 interactions with chain B, Hydrophobic interactions: B:L.212 Metal complexes: B:H.209 CLA.32: 5 residues within 4Å: Chain B: I.225, P.226, N.227, F.228 Ligands: CLA.30 3 PLIP interactions: 3 interactions with chain B, Hydrophobic interactions: B:I.225, B:P.226 Hydrogen bonds: B:N.227 CLA.39: 14 residues within 4Å: Chain B: I.152, F.172, G.173, F.174 Chain C: A.47, A.48, P.50, F.51, V.66, F.68 Ligands: II0.38, CLA.40, IHT.54, LHG.56 7 PLIP interactions: 5 interactions with chain C, 2 interactions with chain B, Hydrophobic interactions: C:A.48, C:P.50, C:F.51, C:F.68, B:I.152, B:F.174 Metal complexes: C:A.48 CLA.40: 19 residues within 4Å: Chain C: L.58, G.64, D.65, V.66, G.67, F.68, D.69, F.73, S.74, L.82, R.83, E.86, R.186, M.189, I.190 Ligands: II0.38, CLA.39, CLA.41, II0.52 19 PLIP interactions: 19 interactions with chain C, Hydrophobic interactions: C:V.66, C:F.68, C:F.68, C:F.73, C:L.82, C:L.82, C:R.186, C:R.186, C:M.189, C:I.190 Hydrogen bonds: C:D.65, C:V.66, C:G.67, C:F.68 Salt bridges: C:R.83, C:R.186 pi-Cation interactions: C:R.186, C:R.186 Metal complexes: C:E.86 CLA.41: 13 residues within 4Å: Chain C: F.73, F.77, L.82, H.89 Chain H: W.171 Ligands: CLA.40, CLA.44, CLA.45, CLA.50, II0.52, IHT.54, LMG.55, CLA.112 4 PLIP interactions: 1 interactions with chain H, 3 interactions with chain C, Hydrophobic interactions: H:W.171 pi-Stacking: C:H.89, C:H.89 Metal complexes: C:H.89 CLA.42: 19 residues within 4Å: Chain C: F.92, L.95, A.96, L.98, G.99, V.102, Q.103, Y.106, T.107, F.108, F.111, P.112, M.114, F.123, I.132 Ligands: CLA.43, CLA.44, II0.52, II0.53 12 PLIP interactions: 12 interactions with chain C, Hydrophobic interactions: C:L.95, C:L.95, C:A.96, C:L.98, C:V.102, C:Q.103, C:Y.106, C:F.123, C:F.123, C:F.123, C:I.132 Hydrogen bonds: C:F.108 CLA.43: 13 residues within 4Å: Chain C: Q.126, G.127, G.128, Q.131, I.132, W.135 Chain D: F.218, S.220, L.221 Ligands: CLA.42, II0.53, II0.57, CLA.67 7 PLIP interactions: 4 interactions with chain C, 3 interactions with chain D, Hydrophobic interactions: C:I.132, C:W.135, C:W.135, D:F.218, D:L.221 Hydrogen bonds: C:Q.126, D:L.221 CLA.44: 11 residues within 4Å: Chain C: H.120, V.124, G.129, S.130, I.132, I.133 Ligands: CLA.41, CLA.42, II0.52, IHT.54, LMG.55 8 PLIP interactions: 8 interactions with chain C, Hydrophobic interactions: C:V.124, C:I.132, C:I.132, C:I.133, C:I.133 pi-Stacking: C:H.120, C:H.120 Metal complexes: C:H.120 CLA.45: 15 residues within 4Å: Chain C: V.81, E.84, A.85, K.88, H.89, I.136, S.137, E.140, G.143, V.144, L.147 Chain H: I.167, W.171 Ligands: CLA.41, LMG.55 5 PLIP interactions: 4 interactions with chain C, 1 interactions with chain H, Hydrophobic interactions: C:I.136, C:L.147, H:I.167 Salt bridges: C:K.88 Metal complexes: C:E.140 CLA.46: 17 residues within 4Å: Chain C: R.91, M.94, L.95, G.158, D.159, F.160, A.161, F.162, D.163, L.167, G.168, Y.177, K.178, E.181 Ligands: KC2.48, II0.51, II0.53 17 PLIP interactions: 17 interactions with chain C, Hydrophobic interactions: C:R.91, C:R.91, C:M.94, C:L.95, C:F.160, C:F.162, C:L.167, C:Y.177, C:K.178 Hydrogen bonds: C:R.91, C:D.159, C:F.160, C:F.162, C:G.168 pi-Cation interactions: C:R.91, C:R.91 Metal complexes: C:E.181 CLA.47: 8 residues within 4Å: Chain C: R.176, V.179, A.180, K.183, H.184, L.187 Ligands: KC2.48, LHG.56 5 PLIP interactions: 5 interactions with chain C, Hydrophobic interactions: C:K.183, C:K.183, C:L.187 Salt bridges: C:K.183 pi-Cation interactions: C:K.183 CLA.49: 17 residues within 4Å: Chain C: I.190, G.193, G.194, H.197, Q.198, V.201, T.202, Q.209, F.213, Q.214, S.215 Ligands: CLA.24, II0.36, II0.38, CLA.50, II0.51, IHT.54 4 PLIP interactions: 4 interactions with chain C, Hydrophobic interactions: C:Q.198, C:V.201, C:F.213, C:F.213 CLA.50: 7 residues within 4Å: Chain C: H.197, W.200, V.201 Ligands: II0.38, CLA.41, CLA.49, IHT.54 3 PLIP interactions: 3 interactions with chain C, Hydrophobic interactions: C:W.200, C:W.200 Metal complexes: C:H.197 CLA.58: 14 residues within 4Å: Chain C: F.142, F.160, A.161, F.162 Chain D: Y.48, A.49, M.50, P.51, F.52, V.67, F.69 Ligands: II0.57, CLA.59, 8CT.72 6 PLIP interactions: 3 interactions with chain D, 3 interactions with chain C, Hydrophobic interactions: D:F.52, D:F.52, C:F.142, C:F.162, C:F.162 Metal complexes: D:A.49 CLA.59: 20 residues within 4Å: Chain D: L.59, M.63, A.64, G.65, D.66, V.67, G.68, F.69, D.70, F.74, L.83, R.84, E.87, R.191, M.194 Ligands: II0.57, CLA.58, CLA.60, II0.70, 8CT.72 18 PLIP interactions: 18 interactions with chain D, Hydrophobic interactions: D:L.59, D:V.67, D:F.69, D:F.74, D:L.83, D:L.83, D:E.87, D:R.191, D:R.191 Hydrogen bonds: D:D.66, D:V.67, D:G.68, D:F.69, D:R.191 Salt bridges: D:R.84 pi-Cation interactions: D:R.191, D:R.191 Metal complexes: D:E.87 CLA.60: 13 residues within 4Å: Chain D: F.78, W.82, L.83, A.86, H.90 Chain H: F.151, L.155, V.158 Ligands: CLA.59, CLA.63, CLA.68, II0.70, 8CT.72 5 PLIP interactions: 3 interactions with chain D, 2 interactions with chain H, Hydrophobic interactions: D:A.86, H:L.155, H:V.158 pi-Stacking: D:H.90 Metal complexes: D:H.90 CLA.61: 16 residues within 4Å: Chain D: L.96, G.97, L.99, G.100, V.103, Q.104, A.107, N.108, L.109, F.114, N.116, A.122, V.126, I.134 Ligands: II0.70, II0.71 10 PLIP interactions: 10 interactions with chain D, Hydrophobic interactions: D:L.96, D:L.96, D:L.99, D:V.103, D:Q.104, D:F.114, D:F.114, D:V.126, D:I.134 Hydrogen bonds: D:L.109 CLA.62: 7 residues within 4Å: Chain D: F.114, G.129, G.130, Q.133, I.134, S.137 Ligands: II0.71 2 PLIP interactions: 2 interactions with chain D, Hydrophobic interactions: D:I.134, D:I.134 CLA.63: 13 residues within 4Å: Chain D: W.82, E.85, A.86, K.89, H.90, F.135, L.138, G.139, E.142, N.146, L.150, M.155 Ligands: CLA.60 9 PLIP interactions: 9 interactions with chain D, Hydrophobic interactions: D:W.82, D:K.89, D:F.135, D:F.135, D:L.138, D:L.150, D:L.150, D:L.150 Salt bridges: D:K.89 CLA.64: 18 residues within 4Å: Chain D: R.92, M.95, L.96, G.163, D.164, L.165, D.166, F.167, L.172, S.173, F.182, E.183, E.186 Chain H: K.141 Ligands: CLA.66, II0.69, II0.71, SQD.109 19 PLIP interactions: 18 interactions with chain D, 1 interactions with chain H, Hydrophobic interactions: D:R.92, D:R.92, D:M.95, D:L.96, D:L.96, D:L.165, D:F.167, D:F.182, D:F.182, D:E.183, D:E.186 Hydrogen bonds: D:R.92, D:D.164, D:L.165, D:F.167 pi-Cation interactions: D:R.92, D:R.92 Metal complexes: D:E.186 Salt bridges: H:K.141 CLA.65: 10 residues within 4Å: Chain D: R.181, L.184, A.185, K.188, H.189, L.192 Chain H: Q.128, V.129 Ligands: II0.57, CLA.66 6 PLIP interactions: 1 interactions with chain H, 5 interactions with chain D, Hydrophobic interactions: H:V.129, D:K.188, D:K.188, D:L.192, D:L.192 Salt bridges: D:K.188 CLA.66: 11 residues within 4Å: Chain A: F.154 Chain D: F.182, H.189, L.192 Chain H: V.126, Q.128 Ligands: CLA.7, CLA.64, CLA.65, II0.69, SQD.109 5 PLIP interactions: 3 interactions with chain D, 1 interactions with chain H, 1 interactions with chain A, Hydrophobic interactions: D:L.192, A:F.154 pi-Stacking: D:H.189 Metal complexes: D:H.189 Hydrogen bonds: H:Q.128 CLA.67: 15 residues within 4Å: Chain D: I.195, G.199, H.202, Q.203, L.206, T.207, Q.214, F.218, K.219, L.221 Ligands: CLA.43, II0.53, II0.57, II0.69, 8CT.72 2 PLIP interactions: 2 interactions with chain D, Hydrophobic interactions: D:H.202 Hydrogen bonds: D:Q.214 CLA.68: 6 residues within 4Å: Chain D: H.202, L.205, L.206 Ligands: II0.57, CLA.60, 8CT.72 3 PLIP interactions: 3 interactions with chain D, Hydrophobic interactions: D:L.205 pi-Stacking: D:H.202 Metal complexes: D:H.202 CLA.73: 8 residues within 4Å: Chain E: X.48, X.50, X.51 Chain F: F.77, W.81, P.150 Ligands: CLA.78, CLA.81 2 PLIP interactions: 2 interactions with chain F, Hydrophobic interactions: F:W.81, F:P.150 CLA.76: 11 residues within 4Å: Chain F: A.48, P.50, F.51, I.66, F.68 Chain G: F.134, Y.152, S.153, F.154 Ligands: 8CT.90, II0.92 8 PLIP interactions: 6 interactions with chain F, 2 interactions with chain G, Hydrophobic interactions: F:A.48, F:P.50, F:F.51, F:I.66, F:F.68, G:F.134, G:F.154 Metal complexes: F:A.48 CLA.77: 20 residues within 4Å: Chain F: L.58, G.64, D.65, I.66, G.67, F.68, D.69, F.73, S.74, L.82, R.83, A.85, E.86, H.89, R.189, M.192, I.193 Ligands: CLA.78, II3.88, II0.92 19 PLIP interactions: 19 interactions with chain F, Hydrophobic interactions: F:I.66, F:F.68, F:F.73, F:F.73, F:L.82, F:L.82, F:A.85, F:R.189, F:R.189, F:I.193 Hydrogen bonds: F:D.65, F:I.66, F:G.67, F:F.68 Salt bridges: F:R.83, F:R.189 pi-Stacking: F:F.68 pi-Cation interactions: F:R.189 Metal complexes: F:E.86 CLA.78: 12 residues within 4Å: Chain F: F.73, F.77, W.81, L.82, A.85, H.89 Ligands: CLA.73, CLA.77, CLA.81, CLA.86, II3.88, 8CT.90 4 PLIP interactions: 4 interactions with chain F, Hydrophobic interactions: F:F.73, F:A.85 pi-Stacking: F:H.89, F:H.89 CLA.79: 16 residues within 4Å: Chain F: L.95, G.96, G.99, V.102, Q.103, V.106, T.107, L.108, F.111, S.112, D.120, F.121, V.124, I.132 Ligands: II3.88, II0.89 8 PLIP interactions: 8 interactions with chain F, Hydrophobic interactions: F:L.95, F:L.95, F:V.102, F:V.106, F:L.108, F:V.124, F:I.132 Hydrogen bonds: F:L.108 CLA.81: 11 residues within 4Å: Chain F: W.81, A.85, K.88, H.89, F.133, I.136, E.140, N.144, L.148 Ligands: CLA.73, CLA.78 10 PLIP interactions: 10 interactions with chain F, Hydrophobic interactions: F:W.81, F:K.88, F:F.133, F:I.136, F:L.148, F:L.148, F:L.148 Salt bridges: F:K.88 pi-Cation interactions: F:K.88 Metal complexes: F:E.140 CLA.82: 20 residues within 4Å: Chain F: R.91, M.94, L.95, G.161, D.162, L.163, G.164, F.165, D.166, C.170, G.171, L.177, R.180, Q.181, V.183, E.184, N.187 Ligands: KC2.84, II0.87, II0.89 21 PLIP interactions: 21 interactions with chain F, Hydrophobic interactions: F:R.91, F:R.91, F:L.95, F:L.95, F:L.163, F:F.165, F:F.165, F:L.177, F:R.180, F:Q.181, F:V.183, F:N.187 Hydrogen bonds: F:R.91, F:D.162, F:L.163, F:G.164, F:F.165 Salt bridges: F:R.180 pi-Cation interactions: F:R.91, F:R.91 Metal complexes: F:E.184 CLA.83: 7 residues within 4Å: Chain F: L.182, V.183, K.186, N.187, L.190 Ligands: KC2.84, II0.92 4 PLIP interactions: 4 interactions with chain F, Hydrophobic interactions: F:L.190 Hydrogen bonds: F:N.187 Salt bridges: F:K.186 pi-Cation interactions: F:K.186 CLA.85: 17 residues within 4Å: Chain F: I.193, G.196, G.197, H.200, Q.201, L.204, T.205, Q.212, F.216, K.217, I.219 Ligands: CLA.86, II0.87, 8CT.90, II0.92, CLA.97, II0.107 2 PLIP interactions: 2 interactions with chain F, Hydrophobic interactions: F:F.216, F:F.216 CLA.86: 10 residues within 4Å: Chain F: H.200, L.203, L.204 Chain H: T.88 Ligands: CLA.78, CLA.85, 8CT.90, II0.92, LHG.110, CLA.111 2 PLIP interactions: 2 interactions with chain F, Hydrophobic interactions: F:L.203 Metal complexes: F:H.200 CLA.93: 14 residues within 4Å: Chain A: F.152, F.171, G.172, F.173 Chain G: D.39, S.40, V.41, P.42, F.43, V.58, F.60 Ligands: II0.19, CLA.94, IHT.108 8 PLIP interactions: 5 interactions with chain G, 3 interactions with chain A, Hydrophobic interactions: G:V.41, G:P.42, G:F.43, G:F.60, A:F.152, A:F.152, A:F.173 Metal complexes: G:S.40 CLA.94: 21 residues within 4Å: Chain G: L.50, V.55, G.56, D.57, V.58, G.59, F.60, D.61, F.65, L.74, R.75, E.78, H.81, R.179, M.182, L.183 Ligands: II0.19, CLA.93, CLA.95, II0.106, IHT.108 16 PLIP interactions: 16 interactions with chain G, Hydrophobic interactions: G:V.58, G:F.60, G:F.65, G:F.65, G:L.74, G:L.74, G:R.179, G:L.183 Hydrogen bonds: G:D.57, G:V.58, G:G.59, G:F.60 Salt bridges: G:R.75 pi-Cation interactions: G:R.179, G:R.179 Metal complexes: G:E.78 CLA.95: 13 residues within 4Å: Chain G: F.65, F.69, L.74, H.81 Chain H: W.101, W.109 Ligands: CLA.94, CLA.98, CLA.99, CLA.104, II0.106, IHT.108, SQD.109 7 PLIP interactions: 4 interactions with chain G, 3 interactions with chain H, Hydrophobic interactions: G:F.69, G:L.74, H:W.101, H:W.109, H:W.109 pi-Stacking: G:H.81, G:H.81 CLA.96: 17 residues within 4Å: Chain G: L.87, A.88, L.90, G.91, V.94, Q.95, Y.98, T.99, F.100, F.103, D.104, A.111, I.115, I.124 Ligands: CLA.97, II0.106, II0.107 13 PLIP interactions: 13 interactions with chain G, Hydrophobic interactions: G:L.87, G:L.87, G:L.90, G:V.94, G:Y.98, G:F.100, G:F.100, G:F.100, G:F.103, G:F.103, G:I.115, G:I.124 Hydrogen bonds: G:F.100 CLA.97: 14 residues within 4Å: Chain F: F.216, I.219 Chain G: F.100, F.103, S.118, G.119, G.120, Q.123, I.124, W.127 Ligands: CLA.85, II0.92, CLA.96, II0.107 5 PLIP interactions: 4 interactions with chain G, 1 interactions with chain F, Hydrophobic interactions: G:F.100, G:W.127, G:W.127, F:F.216 pi-Stacking: G:W.127 CLA.98: 15 residues within 4Å: Chain G: H.112, D.113, V.116, M.121, S.122, I.124, L.125, T.128 Chain H: P.90, I.91, F.94 Ligands: CLA.95, CLA.104, II0.106, IHT.108 7 PLIP interactions: 5 interactions with chain G, 2 interactions with chain H, Hydrophobic interactions: G:V.116, G:I.124, G:L.125, H:F.94, H:F.94 Salt bridges: G:H.112 Metal complexes: G:H.112 CLA.99: 21 residues within 4Å: Chain G: V.73, A.77, K.80, H.81, I.84, L.125, T.128, S.129, E.132, I.133, G.136, L.139 Chain H: V.97, L.100, W.101, F.104, A.105, V.108, W.109 Ligands: CLA.95, CLA.111 16 PLIP interactions: 7 interactions with chain H, 9 interactions with chain G, Hydrophobic interactions: H:L.100, H:W.101, H:F.104, H:V.108, G:K.80, G:K.80, G:I.84, G:L.125, G:L.139 pi-Stacking: H:W.101, H:W.101, H:W.101 Salt bridges: G:K.80 pi-Cation interactions: G:K.80, G:K.80 Metal complexes: G:E.132 CLA.100: 19 residues within 4Å: Chain G: R.83, M.86, L.87, L.90, G.150, D.151, Y.152, S.153, F.154, D.155, L.159, S.160, R.167, Y.170, A.171, E.174 Ligands: KC2.102, II0.105, II0.107 20 PLIP interactions: 20 interactions with chain G, Hydrophobic interactions: G:R.83, G:R.83, G:M.86, G:L.87, G:L.87, G:L.90, G:F.154, G:D.155, G:L.159, G:Y.170, G:Y.170 Hydrogen bonds: G:R.83, G:D.151, G:Y.152, G:F.154, G:S.160 Salt bridges: G:R.167 pi-Cation interactions: G:R.83, G:R.83 Metal complexes: G:E.174 CLA.101: 7 residues within 4Å: Chain G: R.169, L.172, A.173, K.176, H.177 Ligands: II0.19, KC2.102 3 PLIP interactions: 3 interactions with chain G, Hydrophobic interactions: G:K.176 Salt bridges: G:K.176 pi-Cation interactions: G:K.176 CLA.103: 16 residues within 4Å: Chain G: L.183, S.186, G.187, H.190, Q.191, I.194, T.195, Q.202, F.206, R.207, I.209 Ligands: CLA.5, II0.19, CLA.104, II0.105, IHT.108 1 PLIP interactions: 1 interactions with chain G, Hydrophobic interactions: G:Q.191 CLA.104: 7 residues within 4Å: Chain G: H.190, F.193 Ligands: II0.19, CLA.95, CLA.98, CLA.103, IHT.108 4 PLIP interactions: 4 interactions with chain G, Hydrophobic interactions: G:F.193, G:F.193 pi-Stacking: G:H.190 Metal complexes: G:H.190 CLA.111: 11 residues within 4Å: Chain G: L.125, L.126, S.129 Chain H: L.87, T.88, H.93, S.96, V.97 Ligands: CLA.86, II0.92, CLA.99 4 PLIP interactions: 2 interactions with chain G, 2 interactions with chain H, Hydrophobic interactions: G:L.125, G:L.126, H:L.87 Salt bridges: H:H.93 CLA.112: 10 residues within 4Å: Chain H: A.162, W.163, K.164, P.165, I.167, L.168, I.169, W.171, K.172 Ligands: CLA.41 10 PLIP interactions: 10 interactions with chain H, Hydrophobic interactions: H:W.163, H:L.168, H:L.168 Hydrogen bonds: H:I.167, H:L.168, H:I.169 Salt bridges: H:K.172 pi-Stacking: H:W.163, H:W.163 Metal complexes: H:W.163

6 x KC2: Chlorophyll c2(Non-covalent)

KC2.10: 7 residues within 4Å: Chain A: R.187, V.191, N.195, L.198 Ligands: CLA.8, CLA.9, IHT.14 5 PLIP interactions: 5 interactions with chain A, Hydrophobic interactions: A:V.191, A:V.191, A:L.198 Hydrogen bonds: A:R.187 Salt bridges: A:R.187 KC2.29: 8 residues within 4Å: Chain B: R.188, R.189, T.192, N.196, L.199 Ligands: CLA.27, CLA.28, II0.33 8 PLIP interactions: 8 interactions with chain B, Hydrophobic interactions: B:T.192, B:T.192, B:L.199 Hydrogen bonds: B:R.188, B:R.188 Salt bridges: B:R.188, B:R.188, B:R.189 KC2.48: 8 residues within 4Å: Chain C: R.176, Y.177, A.180, H.184, L.187 Ligands: CLA.46, CLA.47, II0.51 4 PLIP interactions: 4 interactions with chain C, Hydrophobic interactions: C:L.187 Salt bridges: C:R.176, C:H.184 Metal complexes: C:H.184 KC2.80: 8 residues within 4Å: Chain F: F.111, P.125, T.127, G.128, Q.131, I.132, T.135 Ligands: II0.89 4 PLIP interactions: 4 interactions with chain F, Hydrophobic interactions: F:F.111, F:I.132, F:I.132, F:T.135 KC2.84: 6 residues within 4Å: Chain F: R.179, V.183, N.187 Ligands: CLA.82, CLA.83, II0.87 3 PLIP interactions: 3 interactions with chain F, Hydrophobic interactions: F:V.183, F:V.183 Hydrogen bonds: F:R.179 KC2.102: 6 residues within 4Å: Chain G: Y.170, H.177, L.180 Ligands: CLA.100, CLA.101, II0.105 4 PLIP interactions: 4 interactions with chain G, Hydrophobic interactions: G:Y.170, G:L.180 pi-Stacking: G:H.177 Metal complexes: G:H.177

5 x IHT: (1~{R})-3,5,5-trimethyl-4-[(3~{E},5~{E},7~{E},9~{E},11~{E},13~{E},15~{E},17~{E})-3,7,12,16-tetramethyl-18-(2,6,6-trimethylcyclohexen-1-yl)octadeca-3,5,7,9,11,13,15,17-octaen-1-ynyl]cyclohex-3-en-1-ol(Non-covalent)

IHT.14: 17 residues within 4Å: Chain A: M.100, A.103, T.104, I.107, F.173, D.174, P.175, C.178, N.195, A.199, A.202, M.206, H.209, P.217 Ligands: CLA.8, KC2.10, CLA.11 8 PLIP interactions: 8 interactions with chain A Hydrophobic interactions: A:M.100, A:A.103, A:I.107, A:A.199, A:A.202 Hydrogen bonds: A:D.174, A:P.175, A:C.178 IHT.17: 16 residues within 4Å: Chain A: F.74, T.127, H.130, D.131, I.201, G.204, I.207, H.208 Ligands: CLA.1, CLA.2, CLA.3, CLA.6, CLA.11, CLA.12, II0.15, II0.16 5 PLIP interactions: 5 interactions with chain A Hydrophobic interactions: A:T.127, A:I.201, A:I.207, A:I.207 Hydrogen bonds: A:D.131 IHT.37: 15 residues within 4Å: Chain B: F.74, M.127, H.130, N.131, G.205, V.208, H.209, F.235 Ligands: CLA.20, CLA.22, CLA.25, CLA.30, CLA.31, II3.34, II0.35 8 PLIP interactions: 8 interactions with chain B Hydrophobic interactions: B:F.74, B:M.127, B:H.130, B:V.208, B:V.208, B:F.235 Hydrogen bonds: B:N.131, B:N.131 IHT.54: 19 residues within 4Å: Chain B: W.145, L.148, I.152 Chain C: F.68, V.117, H.120, D.121, G.193, I.196, H.197, W.200 Ligands: II0.38, CLA.39, CLA.41, CLA.44, CLA.49, CLA.50, II0.52, LHG.56 10 PLIP interactions: 3 interactions with chain B, 7 interactions with chain C Hydrophobic interactions: B:W.145, B:L.148, B:I.152, C:F.68, C:V.117, C:I.196, C:W.200, C:W.200 Hydrogen bonds: C:H.120, C:D.121 IHT.108: 17 residues within 4Å: Chain A: F.148 Chain G: I.109, H.112, L.183, F.185, S.186, V.189, H.190, F.193 Ligands: II0.19, CLA.93, CLA.94, CLA.95, CLA.98, CLA.103, CLA.104, II0.106 7 PLIP interactions: 5 interactions with chain G, 2 interactions with chain A Hydrophobic interactions: G:H.112, G:F.185, G:V.189, G:V.189, G:F.193, A:F.148, A:F.148

21 x II0: (1~{R})-3,5,5-trimethyl-4-[(3~{E},5~{E},7~{E},9~{E},11~{E},13~{E},15~{E})-3,7,12,16-tetramethyl-18-[(4~{R})-2,6,6-trimethyl-4-oxidanyl-cyclohexen-1-yl]octadeca-3,5,7,9,11,13,15-heptaen-1,17-diynyl]cyclohex-3-en-1-ol(Non-covalent)

II0.15: 18 residues within 4Å: Chain A: F.74, D.75, P.76, L.77, F.79, V.98, C.99, A.102, Q.109, I.126, L.129, M.200, I.207 Ligands: CLA.2, CLA.3, CLA.4, CLA.6, IHT.17 8 PLIP interactions: 8 interactions with chain A Hydrophobic interactions: A:F.74, A:F.74, A:V.98, A:I.207 Hydrogen bonds: A:D.75, A:L.77, A:I.126, A:I.126 II0.16: 10 residues within 4Å: Chain A: K.194, R.197, L.198, I.201 Ligands: CLA.1, CLA.2, CLA.9, CLA.11, CLA.12, IHT.17 5 PLIP interactions: 5 interactions with chain A Hydrophobic interactions: A:R.197, A:L.198, A:L.198, A:I.201 Hydrogen bonds: A:R.197 II0.19: 18 residues within 4Å: Chain A: G.137, Q.140, Q.141, W.145 Chain G: K.176, R.179, L.180, L.183, I.194, I.209 Ligands: CLA.5, LMG.18, CLA.93, CLA.94, CLA.101, CLA.103, CLA.104, IHT.108 11 PLIP interactions: 8 interactions with chain G, 3 interactions with chain A Hydrophobic interactions: G:K.176, G:L.180, G:L.180, G:L.183, G:I.194, G:I.209, A:Q.141, A:W.145, A:W.145 Hydrogen bonds: G:R.179, G:R.179 II0.33: 16 residues within 4Å: Chain B: M.100, A.103, T.104, F.174, D.175, P.176, C.179, L.199, A.203, M.207, H.210, P.218, F.221 Ligands: CLA.27, KC2.29, CLA.30 9 PLIP interactions: 9 interactions with chain B Hydrophobic interactions: B:M.100, B:A.103, B:P.176, B:L.199, B:A.203 Hydrogen bonds: B:D.175, B:P.176, B:C.179, B:P.218 II0.35: 10 residues within 4Å: Chain B: K.195, R.198, L.199, I.202 Ligands: CLA.20, CLA.21, CLA.28, CLA.30, CLA.31, IHT.37 5 PLIP interactions: 5 interactions with chain B Hydrophobic interactions: B:L.199, B:L.199, B:I.202, B:I.202 Hydrogen bonds: B:R.198 II0.36: 19 residues within 4Å: Chain B: K.94, R.97, V.98, L.101, P.115, G.116, F.117, E.120, Q.136, L.142, L.146, E.150, F.172 Chain C: S.215 Ligands: CLA.23, CLA.24, CLA.26, CLA.27, CLA.49 8 PLIP interactions: 8 interactions with chain B Hydrophobic interactions: B:K.94, B:R.97, B:V.98, B:L.101, B:F.117, B:L.142, B:L.146, B:L.146 II0.38: 16 residues within 4Å: Chain B: G.137, Q.141, L.144, W.145 Chain C: K.183, R.186, L.187, I.190, V.201 Ligands: CLA.24, CLA.39, CLA.40, CLA.49, CLA.50, IHT.54, LHG.56 8 PLIP interactions: 2 interactions with chain B, 6 interactions with chain C Hydrophobic interactions: B:L.144, B:W.145, C:R.186, C:L.187, C:I.190, C:I.190, C:V.201 Hydrogen bonds: C:R.186 II0.51: 15 residues within 4Å: Chain C: M.94, V.97, L.98, F.162, D.163, P.164, L.165, L.167, L.187, A.191, F.195, Q.198 Ligands: CLA.46, KC2.48, CLA.49 13 PLIP interactions: 13 interactions with chain C Hydrophobic interactions: C:M.94, C:V.97, C:L.98, C:P.164, C:L.165, C:L.165, C:L.167, C:L.187, C:A.191, C:F.195 Hydrogen bonds: C:D.163, C:L.165, C:Q.198 II0.52: 20 residues within 4Å: Chain B: I.152 Chain C: F.68, D.69, P.70, L.71, G.72, F.73, H.89, F.92, A.96, F.100, Q.103, P.116, M.189, I.192 Ligands: CLA.40, CLA.41, CLA.42, CLA.44, IHT.54 14 PLIP interactions: 13 interactions with chain C, 1 interactions with chain B Hydrophobic interactions: C:F.68, C:L.71, C:L.71, C:F.92, C:F.92, C:A.96, C:F.100, C:F.100, C:M.189, B:I.152 Hydrogen bonds: C:D.69, C:L.71, C:G.72, C:P.116 II0.53: 16 residues within 4Å: Chain C: K.88, R.91, F.92, L.95, F.110, F.111, Q.126, I.132, I.136, E.140 Chain D: S.220, L.221 Ligands: CLA.42, CLA.43, CLA.46, CLA.67 11 PLIP interactions: 10 interactions with chain C, 1 interactions with chain D Hydrophobic interactions: C:R.91, C:F.92, C:F.92, C:F.92, C:F.110, C:F.111, C:F.111, C:I.132, C:I.136, C:I.136 Hydrogen bonds: D:S.220 II0.57: 17 residues within 4Å: Chain C: G.127, S.130, Q.131, F.134, W.135 Chain D: K.188, R.191, L.192, I.195, L.206 Ligands: CLA.43, CLA.58, CLA.59, CLA.65, CLA.67, CLA.68, 8CT.72 10 PLIP interactions: 3 interactions with chain C, 7 interactions with chain D Hydrophobic interactions: C:Q.131, C:F.134, C:W.135, D:R.191, D:L.192, D:L.192, D:I.195, D:I.195, D:L.206 Hydrogen bonds: D:R.191 II0.69: 17 residues within 4Å: Chain D: M.95, C.98, L.99, F.167, D.168, P.169, L.170, H.189, L.192, A.193, G.196, M.200, Q.203, L.215 Ligands: CLA.64, CLA.66, CLA.67 9 PLIP interactions: 9 interactions with chain D Hydrophobic interactions: D:M.95, D:L.99, D:F.167, D:L.170, D:L.170, D:L.192, D:A.193 Hydrogen bonds: D:L.170, D:Q.203 II0.70: 21 residues within 4Å: Chain C: F.142 Chain D: F.69, D.70, P.71, L.72, F.74, H.90, V.93, C.94, G.97, F.101, Q.104, A.119, F.123, M.194, L.197, L.201 Ligands: CLA.59, CLA.60, CLA.61, 8CT.72 10 PLIP interactions: 1 interactions with chain C, 9 interactions with chain D Hydrophobic interactions: C:F.142, D:F.69, D:L.72, D:F.101, D:M.194, D:L.201 Hydrogen bonds: D:D.70, D:L.72, D:Q.104, D:A.119 II0.71: 13 residues within 4Å: Chain D: K.89, R.92, V.93, L.96, L.111, F.114, I.134, L.138, E.142, L.165 Ligands: CLA.61, CLA.62, CLA.64 7 PLIP interactions: 7 interactions with chain D Hydrophobic interactions: D:R.92, D:V.93, D:L.111, D:L.111, D:F.114, D:I.134, D:L.138 II0.87: 15 residues within 4Å: Chain F: M.94, V.97, V.98, D.166, P.167, L.168, G.169, N.187, L.190, A.194, Q.201, L.213 Ligands: CLA.82, KC2.84, CLA.85 10 PLIP interactions: 10 interactions with chain F Hydrophobic interactions: F:V.97, F:V.98, F:L.168, F:L.190, F:A.194, F:L.213 Hydrogen bonds: F:D.166, F:L.168, F:G.169, F:Q.201 II0.89: 12 residues within 4Å: Chain F: K.88, R.91, V.92, L.95, M.110, F.111, I.132, I.136, L.163 Ligands: CLA.79, KC2.80, CLA.82 11 PLIP interactions: 11 interactions with chain F Hydrophobic interactions: F:K.88, F:R.91, F:V.92, F:L.95, F:M.110, F:F.111, F:F.111, F:I.132, F:I.132, F:I.136, F:I.136 II0.91: 15 residues within 4Å: Chain A: K.94, R.97, V.98, L.101, Q.136, L.142, L.146, F.171 Chain G: F.212, P.213 Ligands: CLA.4, CLA.5, CLA.7, CLA.8, CLA.13 8 PLIP interactions: 1 interactions with chain G, 7 interactions with chain A Hydrophobic interactions: G:F.212, A:R.97, A:V.98, A:L.101, A:L.142, A:L.142, A:L.146, A:L.146 II0.92: 17 residues within 4Å: Chain F: K.186, R.189, L.190, I.193, L.204 Chain G: G.119, Q.123, L.126, W.127 Ligands: CLA.76, CLA.77, CLA.83, CLA.85, CLA.86, 8CT.90, CLA.97, CLA.111 9 PLIP interactions: 6 interactions with chain F, 3 interactions with chain G Hydrophobic interactions: F:R.189, F:L.190, F:L.190, F:I.193, F:L.204, G:L.126, G:W.127, G:W.127 Hydrogen bonds: F:R.189 II0.105: 16 residues within 4Å: Chain G: M.86, T.89, L.90, F.154, D.155, P.156, L.157, L.159, L.180, A.184, M.188, Q.191, V.199 Ligands: CLA.100, KC2.102, CLA.103 9 PLIP interactions: 9 interactions with chain G Hydrophobic interactions: G:M.86, G:L.90, G:P.156, G:L.180, G:A.184, G:V.199 Hydrogen bonds: G:D.155, G:L.157, G:Q.191 II0.106: 20 residues within 4Å: Chain A: F.152 Chain G: F.60, D.61, P.62, L.63, F.65, H.81, I.84, A.88, Q.95, P.108, H.112, M.121, M.182, F.185 Ligands: CLA.94, CLA.95, CLA.96, CLA.98, IHT.108 12 PLIP interactions: 11 interactions with chain G, 1 interactions with chain A Hydrophobic interactions: G:F.60, G:F.60, G:P.62, G:A.88, G:F.185, G:F.185, G:F.185, G:F.185, A:F.152 Hydrogen bonds: G:D.61, G:L.63, G:P.108 II0.107: 14 residues within 4Å: Chain F: A.218 Chain G: K.80, R.83, I.84, L.87, F.102, F.103, I.124, T.128, E.132 Ligands: CLA.85, CLA.96, CLA.97, CLA.100 8 PLIP interactions: 7 interactions with chain G, 1 interactions with chain F Hydrophobic interactions: G:K.80, G:R.83, G:I.84, G:L.87, G:F.103, G:I.124, G:T.128, F:A.218

4 x LMG: 1,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE(Non-covalent)

LMG.18: 10 residues within 4Å: Chain A: V.134, K.135, Q.140, L.143, V.144, I.151 Ligands: CLA.3, CLA.6, CLA.7, II0.19 4 PLIP interactions: 4 interactions with chain A Hydrophobic interactions: A:L.143, A:V.144, A:I.151 Hydrogen bonds: A:V.134 LMG.55: 9 residues within 4Å: Chain C: V.124, G.127, S.130, I.133, F.134, S.137 Ligands: CLA.41, CLA.44, CLA.45 4 PLIP interactions: 4 interactions with chain C Hydrophobic interactions: C:F.134, C:F.134 Hydrogen bonds: C:V.124, C:S.130 LMG.74: 6 residues within 4Å: Chain E: X.16, X.22, X.30 Chain F: Y.76, F.77 Ligands: LMG.75 1 PLIP interactions: 1 interactions with chain F Hydrophobic interactions: F:F.77 LMG.75: 7 residues within 4Å: Chain E: X.16, X.17, X.19, X.20, X.22 Chain H: L.103 Ligands: LMG.74 2 PLIP interactions: 2 interactions with chain H Hydrophobic interactions: H:L.103, H:L.103

2 x II3: (1~{R})-3,5,5-trimethyl-4-[(3~{E},5~{E},7~{E},9~{E},11~{E},13~{E},15~{E},17~{E})-3,7,12,16-tetramethyl-18-[(1~{R},4~{R})-2,6,6-trimethyl-4-oxidanyl-cyclohex-2-en-1-yl]octadeca-3,5,7,9,11,13,15,17-octaen-1-ynyl]cyclohex-3-en-1-ol(Non-covalent)

II3.34: 20 residues within 4Å: Chain B: F.74, D.75, P.76, L.77, F.79, H.95, V.98, A.102, M.106, Q.109, M.126, L.129, H.130, M.201, V.204 Ligands: CLA.21, CLA.22, CLA.23, CLA.25, IHT.37 11 PLIP interactions: 11 interactions with chain B Hydrophobic interactions: B:F.74, B:P.76, B:L.77, B:F.79, B:V.98, B:A.102, B:H.130, B:M.201, B:V.204 Hydrogen bonds: B:P.76, B:Q.109 II3.88: 20 residues within 4Å: Chain F: F.68, D.69, P.70, V.71, F.73, H.89, V.92, C.93, G.96, F.100, Q.103, P.117, F.121, M.192, F.195, L.199 Ligands: CLA.77, CLA.78, CLA.79, 8CT.90 12 PLIP interactions: 12 interactions with chain F Hydrophobic interactions: F:F.68, F:V.71, F:F.100, F:F.100, F:F.121, F:M.192, F:F.195, F:F.195, F:L.199 Hydrogen bonds: F:D.69, F:Q.103, F:P.117

2 x LHG: 1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE(Non-covalent)

LHG.56: 5 residues within 4Å: Chain C: K.183 Ligands: II0.38, CLA.39, CLA.47, IHT.54 1 PLIP interactions: 1 interactions with chain C Salt bridges: C:K.183 LHG.110: 7 residues within 4Å: Chain F: K.206 Chain H: E.83, Q.85, G.86, L.87, T.88 Ligands: CLA.86 1 PLIP interactions: 1 interactions with chain H Hydrogen bonds: H:Q.85

2 x 8CT: (6'R,11cis,11'cis,13cis,15cis)-4',5'-didehydro-5',6'-dihydro-beta,beta-carotene(Non-covalent)

8CT.72: 17 residues within 4Å: Chain C: W.135, F.138 Chain D: F.69, F.123, F.124, L.197, G.198, L.201, H.202, L.205 Ligands: II0.57, CLA.58, CLA.59, CLA.60, CLA.67, CLA.68, II0.70 12 PLIP interactions: 9 interactions with chain D, 3 interactions with chain C Hydrophobic interactions: D:F.69, D:F.123, D:F.123, D:F.123, D:F.124, D:L.197, D:L.201, D:L.201, D:L.205, C:W.135, C:F.138, C:F.138 8CT.90: 16 residues within 4Å: Chain F: F.68, V.118, F.121, I.193, F.195, G.196, L.199, H.200 Chain G: W.127, F.130 Ligands: CLA.76, CLA.78, CLA.85, CLA.86, II3.88, II0.92 9 PLIP interactions: 6 interactions with chain F, 3 interactions with chain G Hydrophobic interactions: F:F.68, F:V.118, F:F.121, F:I.193, F:F.195, F:L.199, G:W.127, G:F.130, G:F.130

1 x SQD: 1,2-DI-O-ACYL-3-O-[6-DEOXY-6-SULFO-ALPHA-D-GLUCOPYRANOSYL]-SN-GLYCEROL(Non-covalent)

SQD.109: 25 residues within 4Å: Chain A: V.155, V.158, Q.159, Q.162 Chain D: L.170, L.172, F.182 Chain G: K.45, T.48, D.61, P.62, L.63, G.64, F.65, D.67, V.68, F.69 Chain H: E.122, W.123, V.124, G.125, V.126 Ligands: CLA.64, CLA.66, CLA.95 14 PLIP interactions: 1 interactions with chain D, 8 interactions with chain G, 2 interactions with chain A, 3 interactions with chain H Hydrophobic interactions: D:L.170, G:F.65, G:F.65, G:F.65, G:V.68, G:F.69, H:W.123, H:W.123 Hydrogen bonds: G:P.62, G:D.67, A:Q.159, A:Q.162, H:V.126 Salt bridges: G:K.45

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Mao, Z. et al., Structure and distinct supramolecular organization of a PSII-ACPII dimer from a cryptophyte alga Chroomonas placoidea. Nat Commun (2024)

Release Date

2024-06-05

Peptides

ACPII-4: A
ACPII-1: B
ACPII-2: C
ACPII-3: D
Photosystem II reaction center protein G: E
ACPII-6: F
ACPII-5: G
CCPII-S: H

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
0

B
7

C
8

D
9

E
G

F
P

G
p

H
s

Membrane

We predict this structure to be a membrane protein.
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ACPII-4

ACPII-1

ACPII-2

ACPII-3

Photosystem II reaction center protein G

ACPII-6

ACPII-5

CCPII-S

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