SMTL ID : 8xl3.1

Structure of human propionyl-CoA carboxylase at apo-state (PCC-Apo)

Coordinates

PDB Format Compare

Method

ELECTRON MICROSCOPY

Oligo State

hetero-6-6-mer

Ligands

6 x BTN: BIOTIN(Covalent)

BTN.1: 11 residues within 4Å: Chain A: M.693, K.694 Chain B: C.365, P.395, G.396, F.397, P.399 Chain D: T.226, V.230, S.233, V.234 3 PLIP interactions: 1 interactions with chain A, 1 interactions with chain B, 1 interactions with chain D Hydrophobic interactions: A:K.694, D:V.234 Hydrogen bonds: B:F.397 BTN.2: 11 residues within 4Å: Chain B: T.226, V.230, S.233, V.234 Chain C: M.693, K.694 Chain D: C.365, P.395, G.396, F.397, P.399 3 PLIP interactions: 1 interactions with chain C, 1 interactions with chain D, 1 interactions with chain B Hydrophobic interactions: C:K.694, B:V.234 Hydrogen bonds: D:F.397 BTN.3: 11 residues within 4Å: Chain E: M.693, K.694 Chain F: C.365, P.395, G.396, F.397, P.399 Chain L: T.226, V.230, S.233, V.234 3 PLIP interactions: 1 interactions with chain L, 1 interactions with chain F, 1 interactions with chain E Hydrophobic interactions: L:V.234, E:K.694 Hydrogen bonds: F:F.397 BTN.4: 11 residues within 4Å: Chain G: M.693, K.694 Chain H: C.365, P.395, G.396, F.397, P.399 Chain J: T.226, V.230, S.233, V.234 3 PLIP interactions: 1 interactions with chain J, 1 interactions with chain H, 1 interactions with chain G Hydrophobic interactions: J:V.234, G:K.694 Hydrogen bonds: H:F.397 BTN.5: 11 residues within 4Å: Chain H: T.226, V.230, S.233, V.234 Chain I: M.693, K.694 Chain J: C.365, P.395, G.396, F.397, P.399 3 PLIP interactions: 1 interactions with chain J, 1 interactions with chain I, 1 interactions with chain H Hydrogen bonds: J:F.397 Hydrophobic interactions: I:K.694, H:V.234 BTN.6: 11 residues within 4Å: Chain F: T.226, V.230, S.233, V.234 Chain K: M.693, K.694 Chain L: C.365, P.395, G.396, F.397, P.399 3 PLIP interactions: 1 interactions with chain L, 1 interactions with chain F, 1 interactions with chain K Hydrogen bonds: L:F.397 Hydrophobic interactions: F:V.234, K:K.694

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Zhou, F. et al., Structural insights into human propionyl-CoA carboxylase (PCC) and 3-methylcrotonyl-CoA carboxylase (MCC). Elife (2024)

Release Date

2024-10-30

Peptides

Propionyl-CoA carboxylase alpha chain, mitochondrial: ACEGIK
Propionyl-CoA carboxylase beta chain, mitochondrial: BDFHJL

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

C
C

E
E

G
G

I
I

K
K

B
B

D
D

F
F

H
H

J
J

L
L

Propionyl-CoA carboxylase alpha chain, mitochondrial

Propionyl-CoA carboxylase beta chain, mitochondrial

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