SMTL ID : 8z32.1 (1 other biounit)

Crystal Structure of HIF-PHD2 in complex with compound 3

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.50 Å

Oligo State

monomer

Ligands

1 x FE2: FE (II) ION(Non-covalent)

FE2.1: 4 residues within 4Å: Chain A: H.134, D.136, H.195 Ligands: 01.2 4 PLIP interactions: 3 interactions with chain A, 1 Ligand-Water interactions Metal complexes: A:H.134, A:D.136, A:H.195, H2O.1

1 x 01: 2-[[6-[(4-fluorophenyl)methyl]-2-methyl-5-oxidanyl-pyrimidin-4-yl]carbonylamino]ethanoic acid

01.2: 14 residues within 4Å: Chain A: I.77, M.120, A.122, Y.124, Y.131, H.134, D.136, I.148, Y.150, L.164, H.195, V.197, R.204 Ligands: FE2.1 7 PLIP interactions: 7 interactions with chain A Hydrophobic interactions: A:I.77, A:A.122, A:Y.124, A:Y.131, A:Y.131 Hydrogen bonds: A:Y.150 Salt bridges: A:R.204

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Fukuda, T. et al., Discovery of DS44470011: An oral hypoxia-inducible factor prolyl hydroxylase inhibitor for the treatment of renal anemia. Bioorg.Med.Chem.Lett. (2024)

Release Date

2025-02-26

Peptides

Egl nine homolog 1: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Egl nine homolog 1

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