SMTL ID : 8zdg.1

Cryo-EM structure of the integrin avb3 with CWHM-12, conformation 1

Coordinates

PDB Format Compare

Method

ELECTRON MICROSCOPY 3.03 Å

Oligo State

hetero-1-1-mer

Ligands

1 x 01: (2~{S})-3-[2-azanylethanoyl-[3-oxidanyl-5-[(5-oxidanylpyrimidin-2-yl)amino]phenyl]carbonyl-amino]-2-(3-bromanyl-5-~{tert}-butyl-phenyl)propanoic acid

01.1: 11 residues within 4Å: Chain A: R.240, N.241, R.242, D.243, A.244, K.279 Chain B: Y.208, W.209, A.245, D.248, D.249 8 PLIP interactions: 5 interactions with chain A, 3 interactions with chain B Hydrophobic interactions: A:R.240, A:R.242, A:D.243, B:Y.208, B:W.209 Hydrogen bonds: A:K.279, B:D.248 pi-Cation interactions: A:R.242

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Xi, Z., Cryo-EM structure of the integrin avb3 with CWHM-12, conformation 1. To Be Published

Release Date

2025-10-22

Peptides

Integrin beta-3: A
Integrin alpha-V: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

B
A

Integrin beta-3

Integrin alpha-V

Related Entries With Identical Sequence