SMTL ID : 8zvm.1

Human citrate synthase intermediate 1

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.27 Å

Oligo State

homo-dimer

Ligands

1 x OAA: OXALOACETATE ION(Non-covalent)

OAA.1: 9 residues within 4Å: Chain A: H.236, N.240, H.272, H.318, R.327, F.395, R.399 Chain B: R.419 Ligands: ACE.2 11 PLIP interactions: 10 interactions with chain A, 1 interactions with chain B Hydrophobic interactions: A:N.240 Hydrogen bonds: A:H.236, A:N.240, A:R.327 Salt bridges: A:H.236, A:H.236, A:H.272, A:H.318, A:R.327, A:R.399, B:R.419

1 x ACE: ACETYL GROUP(Non-functional Binders)

ACE.2: 6 residues within 4Å: Chain A: H.272, V.372, D.373, F.395 Ligands: OAA.1, COA.3 2 PLIP interactions: 2 interactions with chain A Hydrophobic interactions: A:V.372, A:F.395

1 x COA: COENZYME A(Non-covalent)

COA.3: 15 residues within 4Å: Chain A: A.275, L.307, V.312, V.313, G.315, Y.316, G.317, H.318, A.319, L.359, K.364, A.365, N.371, D.373 Ligands: ACE.2 6 PLIP interactions: 6 interactions with chain A Hydrogen bonds: A:V.313, A:G.315, A:Y.316, A:Y.316, A:A.365, A:N.371

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Yang, L.Y. et al., Human citrate synthase intermediate 1. To Be Published

Release Date

2025-06-18

Peptides

Citrate synthase, mitochondrial: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Citrate synthase, mitochondrial

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