SMTL ID : 9bff.1

Tyrocidine synthetase modules 1 and 2 crosslinked in the condensation state, complex C

Coordinates

PDB Format Compare

Method

ELECTRON MICROSCOPY

Oligo State

hetero-1-1-mer

Ligands

1 x 01: (7S,10aR)-1-methyl-4-{4-[(5R)-1,1,5-trihydroxy-4,4-dimethyl-1,6,10,15-tetraoxo-2-oxa-7,11,14-triaza-1lambda~5~-phosphahexadecan-16-yl]phenyl}-3,5,6,7,8,9,10,10a-octahydrocycloocta[d]pyridazin-7-yl [(5R)-1,1,5-trihydroxy-4,4-dimethyl-1,6,10-trioxo-2-oxa-7,11-diaza-1lambda~5~-phosphatridecan-13-yl]carbamate (non-preferred name)

01.1: 24 residues within 4Å: Chain A: S.563, I.564, I.567 Chain B: G.21, M.22, F.24, H.25, W.153, V.280, S.282, I.299, T.301, Y.337, L.353, V.355, I.356, E.357, E.385, N.388, Y.389, T.392, M.394, D.406, S.1007 13 PLIP interactions: 11 interactions with chain B, 2 interactions with chain A Hydrophobic interactions: B:F.24, B:F.24, B:V.280, B:V.280, B:L.353, B:V.355, B:T.392, A:I.564, A:I.567 Hydrogen bonds: B:S.282, B:S.282, B:E.357, B:N.388

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Heberlig, G.W. et al., Crosslinking Reveals the Molecular Details of Intermodular Condensation and Epimerization in Nonribosomal Peptide Biosynthesis. To Be Published

Release Date

2024-10-09

Peptides

Tyrocidine synthase 1: A
Tyrocidine synthase 2: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Tyrocidine synthase 1

Tyrocidine synthase 2

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