SMTL ID : 9bir.1

Cryo-EM structure of the mammalian peptide transporter PepT2 bound to cefadroxil

Coordinates

PDB Format Compare

Method

ELECTRON MICROSCOPY

Oligo State

hetero-1-1-mer

Ligands

1 x 01: Cefadroxil

01.1: 19 residues within 4Å: Chain A: R.57, Y.61, Y.94, K.161, Y.188, I.191, N.192, W.313, L.316, D.317, Q.319, N.348, P.349, V.352, E.622, S.626, W.649, L.650, V.653 9 PLIP interactions: 9 interactions with chain A Hydrophobic interactions: A:E.622, A:L.650, A:V.653 Hydrogen bonds: A:N.192, A:D.317, A:N.348, A:N.348 Salt bridges: A:R.57, A:K.161

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Parker, J.L. et al., Structural basis for antibiotic transport and inhibition in PepT2. Nat Commun (2024)

Release Date

2024-07-24

Peptides

Solute carrier family 15 member 2: A
nanobody: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Membrane

We predict this structure to be a membrane protein.
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Solute carrier family 15 member 2

nanobody

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