SMTL ID : 9br3.1 (1 other biounit)

Crystal structure of p53 Y220C mutant in complex with PC-10709

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.90 Å

Oligo State

monomer

Ligands

1 x 01: 2-{3-[4-(methanesulfonyl)-2-methoxyanilino]prop-1-yn-1-yl}-N-(1-methylpiperidin-4-yl)-1-(2,2,2-trifluoroethyl)-1H-indol-4-amine

01.1: 15 residues within 4Å: Chain A: L.54, V.56, D.57, T.59, P.60, P.61, P.62, C.129, E.130, P.131, P.132, D.137, C.138, T.139, L.166 10 PLIP interactions: 10 interactions with chain A Hydrophobic interactions: A:V.56, A:V.56, A:T.59, A:P.60, A:P.131, A:P.132 Hydrogen bonds: A:T.59, A:C.129 Water bridges: A:G.63, A:C.129

1 x ZN: ZINC ION

ZN.2: 4 residues within 4Å: Chain A: C.85, H.88, C.147, C.151 4 PLIP interactions: 4 interactions with chain A Metal complexes: A:C.85, A:H.88, A:C.147, A:C.151

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Puzio-Kuter, A.M. et al., Restoration of the Tumor Suppressor Function of Y220C-Mutant p53 by Rezatapopt, a Small Molecule Reactivator. Cancer Discov (2025)

Release Date

2025-03-26

Peptides

Cellular tumor antigen p53: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Cellular tumor antigen p53

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