SMTL ID : 9c8u.1

Human PRC2 - RvLEAM (short) (1:6 molar ratio), cross-linked 10 min

Coordinates

PDB Format Compare

Method

ELECTRON MICROSCOPY

Oligo State

hetero-1-1-1-1-1-1-mer

Ligands

7 x ZN: ZINC ION

ZN.1: 6 residues within 4Å: Chain D: C.527, H.529, C.534, C.538, C.553 Ligands: ZN.2 5 PLIP interactions: 5 interactions with chain D Metal complexes: D:C.527, D:H.529, D:H.529, D:C.534, D:C.538 ZN.2: 6 residues within 4Å: Chain D: C.527, C.540, C.547, C.551 Ligands: ZN.1, ZN.3 4 PLIP interactions: 4 interactions with chain D Metal complexes: D:C.527, D:C.540, D:C.547, D:C.551 ZN.3: 5 residues within 4Å: Chain D: C.534, C.547, C.553, C.557 Ligands: ZN.2 4 PLIP interactions: 4 interactions with chain D Metal complexes: D:C.534, D:C.547, D:C.553, D:C.557 ZN.4: 6 residues within 4Å: Chain D: C.564, C.566, C.570, C.575 Ligands: ZN.5, ZN.6 4 PLIP interactions: 4 interactions with chain D Metal complexes: D:C.564, D:C.566, D:C.570, D:C.575 ZN.5: 6 residues within 4Å: Chain D: C.570, C.584, C.592, C.605 Ligands: ZN.4, ZN.6 4 PLIP interactions: 4 interactions with chain D Metal complexes: D:C.570, D:C.584, D:C.592, D:C.605 ZN.6: 6 residues within 4Å: Chain D: C.564, C.577, C.584, C.589 Ligands: ZN.4, ZN.5 4 PLIP interactions: 4 interactions with chain D Metal complexes: D:C.564, D:C.577, D:C.584, D:C.589 ZN.7: 4 residues within 4Å: Chain D: C.285, C.288, C.293, H.296 4 PLIP interactions: 4 interactions with chain D Metal complexes: D:C.285, D:C.288, D:C.293, D:H.296

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Abe, K.M. et al., Human PRC2 - RvLEAM (short) (1:6 molar ratio), cross-linked 10 min. To Be Published

Release Date

2024-09-04

Peptides

Polycomb protein SUZ12: A
Polycomb protein EED: B
RBAP48: C
Isoform 2 of Histone-lysine N-methyltransferase EZH2: D
Protein Jumonji: E
Zinc finger protein AEBP2: F

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

B
C

C
D

D
A

E
E

F
F

Polycomb protein SUZ12

Polycomb protein EED

RBAP48

Isoform 2 of Histone-lysine N-methyltransferase EZH2

Protein Jumonji

Zinc finger protein AEBP2

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