- Coordinates
- PDB Format
- Method
- ELECTRON MICROSCOPY
- Oligo State
- hetero-6-1-mer
- Ligands
- 4 x ATP: ADENOSINE-5'-TRIPHOSPHATE(Non-covalent)
- 4 x MG: MAGNESIUM ION(Non-covalent)
MG.2: 3 residues within 4Å:- Chain A: T.433, D.493
- Ligands: ATP.1
1 PLIP interactions:1 interactions with chain A- Metal complexes: A:T.433
MG.4: 3 residues within 4Å:- Chain B: T.433, D.493
- Ligands: ATP.3
1 PLIP interactions:1 interactions with chain B- Metal complexes: B:T.433
MG.6: 4 residues within 4Å:- Chain C: T.433, D.493
- Chain D: Q.518
- Ligands: ATP.5
2 PLIP interactions:2 interactions with chain C- Metal complexes: C:T.433, C:D.493
MG.8: 4 residues within 4Å:- Chain D: T.433, D.493, T.541
- Ligands: ATP.7
1 PLIP interactions:1 interactions with chain D- Metal complexes: D:T.433
- 2 x ADP: ADENOSINE-5'-DIPHOSPHATE(Non-covalent)
ADP.9: 14 residues within 4Å:- Chain E: H.394, Y.395, G.429, V.430, G.431, K.432, T.433, S.434, Y.564, I.572, Y.576, V.612, R.613, Q.616
12 PLIP interactions:12 interactions with chain E- Hydrogen bonds: E:Y.395, E:G.429, E:V.430, E:G.431, E:K.432, E:T.433, E:S.434, E:Y.564, E:Y.564, E:R.613
- Salt bridges: E:K.432
- pi-Cation interactions: E:H.394
ADP.10: 14 residues within 4Å:- Chain F: H.394, Y.395, P.428, G.429, V.430, G.431, K.432, T.433, S.434, Y.564, I.572, Y.576, Q.580, V.612
12 PLIP interactions:12 interactions with chain F- Hydrogen bonds: F:Y.395, F:Y.395, F:G.429, F:V.430, F:G.431, F:K.432, F:T.433, F:S.434, F:Y.564, F:Q.580, F:Q.580
- pi-Stacking: F:Y.576
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Mindrebo, J.T. et al., Structural and mechanistic studies on human LONP1 redefine the hand-over-hand translocation mechanism. Biorxiv (2024)
- Release Date
- 2024-08-07
- Peptides
- Lon protease homolog, mitochondrial: ABCDEF
Bound substrate segment undergoing translocation and subsequent degradation: G - SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
BC
CD
DE
EF
FG
G
- Coordinates
- PDB Format
- Method
- ELECTRON MICROSCOPY
- Oligo State
- hetero-6-1-mer
- Ligands
- 4 x ATP: ADENOSINE-5'-TRIPHOSPHATE(Non-covalent)
- 4 x MG: MAGNESIUM ION(Non-covalent)
- 2 x ADP: ADENOSINE-5'-DIPHOSPHATE(Non-covalent)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Mindrebo, J.T. et al., Structural and mechanistic studies on human LONP1 redefine the hand-over-hand translocation mechanism. Biorxiv (2024)
- Release Date
- 2024-08-07
- Peptides
- Lon protease homolog, mitochondrial: ABCDEF
Bound substrate segment undergoing translocation and subsequent degradation: G - SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
BC
CD
DE
EF
FG
G