SMTL ID : 9czu.1 (1 other biounit)

HPK1 kinase domain T165E,S171E phosphomimetic mutant in complex with compound 9

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.85 Å

Oligo State

homo-dimer

Ligands

1 x SO4: SULFATE ION(Non-functional Binders)

SO4.1: 2 residues within 4Å: Chain A: R.24, G.27 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:G.27 Salt bridges: A:R.24

2 x 01: 6-methoxy-4-[(methylamino)methyl]-2-(6-{4-[(2S)-4,4,4-trifluorobutan-2-yl]-4H-1,2,4-triazol-3-yl}pyridin-2-yl)-2,3-dihydro-1H-isoindol-1-one

01.2: 22 residues within 4Å: Chain A: L.25, G.26, G.27, G.28, V.33, A.46, K.48, V.77, M.93, E.94, F.95, C.96, G.97, A.98, G.99, S.100, D.103, A.143, N.144, L.146, A.156, D.157 11 PLIP interactions: 11 interactions with chain A Hydrophobic interactions: A:L.25, A:L.25, A:V.33, A:A.46, A:F.95, A:L.146 Hydrogen bonds: A:C.96, A:D.103, A:D.157 Water bridges: A:E.64, A:S.100 01.3: 22 residues within 4Å: Chain B: L.25, G.26, G.27, G.28, V.33, A.46, K.48, V.77, M.93, E.94, F.95, C.96, G.97, A.98, G.99, S.100, D.103, A.143, N.144, L.146, A.156, D.157 10 PLIP interactions: 10 interactions with chain B Hydrophobic interactions: B:L.25, B:L.25, B:L.25, B:A.46, B:L.146 Hydrogen bonds: B:C.96, B:D.103, B:D.157 Water bridges: B:S.100, B:F.158

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Gallego, R.A. et al., Discovery of PF-07265028, A Selective Small Molecule Inhibitor of Hematopoietic Progenitor Kinase 1 (HPK1) for the Treatment of Cancer. J.Med.Chem. (2024)

Release Date

2024-12-18

Peptides

Mitogen-activated protein kinase kinase kinase kinase 1: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Mitogen-activated protein kinase kinase kinase kinase 1

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