SMTL ID : 9d7j.1

Clostridium acetobutylicum alcohol dehydrogenase bound to NADP+

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.39 Å

Oligo State

homo-dimer

Ligands

2 x NAP: NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE(Non-covalent)

NAP.1: 31 residues within 4Å: Chain A: G.31, A.32, S.33, S.34, G.35, I.36, G.37, I.54, A.55, R.56, R.57, I.82, D.83, L.84, S.85, N.108, A.109, G.110, F.111, L.131, I.158, S.159, S.160, Y.173, K.177, P.205, A.206, A.207, T.208, T.210, E.211 31 PLIP interactions: 31 interactions with chain A Hydrophobic interactions: A:T.208 Hydrogen bonds: A:S.33, A:S.33, A:S.33, A:S.34, A:S.34, A:I.36, A:R.56, A:R.57, A:D.83, A:L.84, A:S.85, A:S.85, A:A.109, A:G.110, A:Y.173, A:K.177, A:A.206, A:T.208, A:T.210 Water bridges: A:G.37, A:R.56, A:R.56, A:N.108, A:G.110, A:S.160, A:G.162, A:T.210, A:S.234 Salt bridges: A:R.56, A:R.57 NAP.3: 32 residues within 4Å: Chain B: G.31, A.32, S.33, S.34, G.35, I.36, G.37, I.54, A.55, R.56, R.57, I.82, D.83, L.84, S.85, N.108, A.109, G.110, F.111, L.131, I.158, S.159, S.160, G.162, Y.173, K.177, P.205, A.206, A.207, T.208, T.210, E.211 33 PLIP interactions: 33 interactions with chain B Hydrophobic interactions: B:T.208 Hydrogen bonds: B:S.33, B:S.33, B:S.33, B:S.33, B:S.34, B:S.34, B:I.36, B:R.56, B:R.57, B:L.84, B:S.85, B:S.85, B:S.85, B:N.108, B:G.110, B:Y.173, B:K.177, B:A.206, B:T.208, B:T.210 Water bridges: B:S.34, B:G.37, B:R.56, B:R.56, B:R.56, B:R.57, B:N.108, B:G.162, B:T.210, B:S.234 Salt bridges: B:R.56, B:R.57

2 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)

EDO.2: 10 residues within 4Å: Chain A: V.144, E.148, L.187, E.190, L.191, A.194, S.196 Chain B: K.116, V.117, N.118 4 PLIP interactions: 1 interactions with chain A, 3 interactions with chain B Hydrogen bonds: A:E.190, B:V.117, B:N.118, B:N.118 EDO.4: 10 residues within 4Å: Chain A: K.116, V.117, N.118 Chain B: V.144, E.148, L.187, E.190, L.191, A.194, S.196 4 PLIP interactions: 1 interactions with chain B, 3 interactions with chain A Hydrogen bonds: B:E.190, A:V.117, A:N.118, A:N.118

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Kudalkar, G.P. et al., Is a Malleable Active Site Loop the Key to High Substrate Promiscuity? Hybrid, Biocatalytic Route to Structurally Diverse Taxoid Side Chains with Remarkable Dual Stereocontrol. Angew.Chem.Int.Ed.Engl. (2025)

Release Date

2025-07-02

Peptides

Oxidoreductase: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Oxidoreductase

Related Entries With Identical Sequence