SMTL ID : 9d8c.3 (3 other biounits)

OXA-58-NA-1-157 2.5 hour complex

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.15 Å

Oligo State

monomer

Ligands

1 x Y33: (5R)-3-{[(3S,5S)-5-(dimethylcarbamoyl)pyrrolidin-3-yl]sulfanyl}-5-[(2S,3R)-3-hydroxy-1-oxobutan-2-yl]-5-methyl-4,5-dihydro-1H-pyrrole-2-carboxylic acid(Covalent)

Y33.1: 12 residues within 4Å: Chain A: A.82, S.83, F.114, W.117, S.130, V.132, L.170, S.221, G.222, W.223, I.260, R.263 9 PLIP interactions: 9 interactions with chain A Hydrophobic interactions: A:F.114, A:W.117, A:V.132, A:I.260 Hydrogen bonds: A:S.83, A:W.223 Water bridges: A:S.130, A:S.130 Salt bridges: A:R.263

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Toth, M. et al., Decarboxylation of the Catalytic Lysine Residue by the C5 alpha-Methyl-Substituted Carbapenem NA-1-157 Leads to Potent Inhibition of the OXA-58 Carbapenemase. Acs Infect Dis. (2024)

Release Date

2024-12-11

Peptides

Beta-lactamase: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
C

Beta-lactamase

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