SMTL ID : 9dlf.1

Arabinosyltransferase AftB in complex with Fab_B3

Coordinates

PDB Format Compare

Method

ELECTRON MICROSCOPY

Oligo State

hetero-1-1-1-mer

Ligands

1 x 6OU: [(2~{R})-1-[2-azanylethoxy(oxidanyl)phosphoryl]oxy-3-hexadecanoyloxy-propan-2-yl] (~{Z})-octadec-9-enoate(Non-covalent)

6OU.1: 16 residues within 4Å: Chain A: L.137, Y.138, A.305, L.308, R.319, P.343, P.344, V.347, A.348, L.351, I.352, L.355, L.381, L.382, P.384, V.385 13 PLIP interactions: 13 interactions with chain A Hydrophobic interactions: A:Y.138, A:L.308, A:V.347, A:A.348, A:L.351, A:I.352, A:L.355, A:L.381, A:L.382, A:P.384, A:V.385 Hydrogen bonds: A:R.319 Salt bridges: A:R.319

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Liu, Y. et al., Mechanistic studies of mycobacterial glycolipid biosynthesis by the mannosyltransferase PimE. Nat Commun (2025)

Release Date

2025-06-25

Peptides

Arabinosyltransferase AftB: A
Fab_B3 light chain: B
Fab_B3 heavy chain: C

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
C

B
A

C
B

Membrane

We predict this structure to be a membrane protein.
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Arabinosyltransferase AftB

Fab_B3 light chain

Fab_B3 heavy chain

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