SMTL ID : 9e7n.1 (1 other biounit)

Pfs230 D13D14 in complex with nanobody W2809

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.49 Å

Oligo State

hetero-1-1-mer

Ligands

1 x NAG- NAG- BMA- MAN- MAN: alpha-D-mannopyranose-(1-3)-[alpha-D-mannopyranose-(1-6)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose

NAG-NAG-BMA-MAN-MAN.1: 8 residues within 4Å: Chain A: T.39, F.68, E.127, N.129, S.131, L.132, V.146, K.148 No protein-ligand interaction detected (PLIP)

1 x NAG- NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)

NAG-NAG.2: 5 residues within 4Å: Chain A: N.182, D.183, D.184, Y.271, N.273 No protein-ligand interaction detected (PLIP)

1 x GOL: GLYCEROL(Non-functional Binders)

GOL.3: 4 residues within 4Å: Chain A: R.48, W.49, N.194, I.253 No protein-ligand interaction detected (PLIP)

1 x NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)

NAG.4: 2 residues within 4Å: Chain A: I.186, N.188 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:I.186

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Dietrich, M.H. et al., Cryo-EM structure of the native Pfs230 and Pfs48/45 fertilisation complex from Plasmodium falciparum. To Be Published

Release Date

2025-07-30

Peptides

Gametocyte surface protein P230: A
Nanobody W2809: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

B
D

Gametocyte surface protein P230

Nanobody W2809

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