SMTL ID : 9f7o.2 (1 other biounit)

N-acetylglucosamine 6-phosphate dehydratase: apo form of NagS

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.30 Å

Oligo State

homo-dimer

Ligands

4 x SO4: SULFATE ION(Non-functional Binders)

SO4.1: 8 residues within 4Å: Chain A: S.54, E.94, S.119, L.120, S.121, G.122, N.124, P.127 7 PLIP interactions: 7 interactions with chain A Hydrogen bonds: A:S.54, A:E.94, A:L.120, A:S.121, A:S.121 Water bridges: A:G.122, A:R.123 SO4.2: 4 residues within 4Å: Chain A: R.19, R.22 Chain B: I.15, R.19 4 PLIP interactions: 2 interactions with chain A, 2 interactions with chain B Salt bridges: A:R.19, A:R.22, B:R.19 Water bridges: B:D.12 SO4.3: 8 residues within 4Å: Chain B: S.54, E.94, S.119, L.120, S.121, G.122, N.124, P.127 7 PLIP interactions: 7 interactions with chain B Hydrogen bonds: B:S.54, B:E.94, B:L.120, B:S.121, B:S.121 Water bridges: B:G.122, B:R.123 SO4.4: 4 residues within 4Å: Chain A: I.15, R.19 Chain B: R.19, R.22 4 PLIP interactions: 2 interactions with chain A, 2 interactions with chain B Water bridges: A:R.19 Salt bridges: A:R.19, B:R.19, B:R.22

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Li, C. et al., A new pathway in central metabolism mediates nutrient control of development and antibiotic production by Streptomyces. Biorxiv (2024)

Release Date

2025-02-19

Peptides

UPF0309 protein SCO4393: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

B
B

UPF0309 protein SCO4393

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