SMTL ID : 9f81.1

Crystal structure of RIOK2 with a covalent compound GCL 47

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 3.02 Å

Oligo State

homo-dimer

Ligands

2 x 01: N-(4-quinazolin-4-ylphenyl)propanamide

01.1: 13 residues within 4Å: Chain A: V.104, G.105, I.110, A.122, M.189, E.190, L.191, I.192, P.196, C.198, F.233, I.236, I.246 11 PLIP interactions: 11 interactions with chain A Hydrophobic interactions: A:I.110, A:A.122, A:I.192, A:P.196, A:P.196, A:P.196, A:F.233, A:I.236, A:I.246, A:I.246 Hydrogen bonds: A:I.192 01.2: 12 residues within 4Å: Chain B: M.102, I.110, A.122, L.191, I.192, G.194, P.196, C.198, Q.199, E.232, F.233, I.236 8 PLIP interactions: 8 interactions with chain B Hydrophobic interactions: B:M.102, B:I.110, B:A.122, B:P.196, B:P.196, B:I.236 Hydrogen bonds: B:I.192, B:Q.199

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Wang, G. et al., Probing the Protein Kinases' Cysteinome by Covalent Fragments. Angew.Chem.Int.Ed.Engl. (2025)

Release Date

2025-01-08

Peptides

Serine/threonine-protein kinase RIO2: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
G

Serine/threonine-protein kinase RIO2

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