SMTL ID : 9fzh.1

Crystal structure of the hPXR-LBD in complex with compound JMV6995

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.50 Å

Oligo State

monomer

Ligands

1 x 01: 2-(1-adamantyl)-~{N}-[7-[1-(phenylmethyl)-5-[(2,4,6-trimethylphenyl)sulfonylamino]benzimidazol-2-yl]heptyl]ethanamide

01.1: 19 residues within 4Å: Chain A: D.87, L.88, V.93, M.125, S.129, F.133, F.163, Q.167, F.170, W.181, Y.188, E.203, M.205, H.289, R.292, L.293, I.296, F.302, M.307 20 PLIP interactions: 20 interactions with chain A Hydrophobic interactions: A:V.93, A:M.125, A:F.170, A:W.181, A:W.181, A:W.181, A:W.181, A:Y.188, A:Y.188, A:E.203, A:L.293, A:L.293, A:I.296, A:F.302, A:F.302 Hydrogen bonds: A:S.129, A:S.129, A:Q.167, A:R.292 pi-Stacking: A:F.170

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Carivenc, C. et al., A two-in-one expression construct for biophysical and structural studies of the human pregnane X receptor ligand-binding domain, a pharmaceutical and environmental target. Acta Crystallogr.,Sect.F (2025)

Release Date

2025-02-19

Peptides

Nuclear receptor subfamily 1 group I member 2: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Nuclear receptor subfamily 1 group I member 2

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