SMTL ID : 9g38.1

CRYSTAL STRUCTURE OF HUMAN CARBONIC ANHYDRASE II IN COMPLEX WITH SALVIANOLIC ACID P

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.20 Å

Oligo State

monomer

Ligands

1 x 01: Salvianolic acid P

01.1: 15 residues within 4Å: Chain A: H.66, N.69, Q.94, H.96, D.131, F.132, G.133, K.134, V.136, Q.137, L.199, T.200, T.201, P.203 Ligands: ZN.2 17 PLIP interactions: 17 interactions with chain A Hydrophobic interactions: A:F.132, A:V.136, A:L.199, A:P.203 Hydrogen bonds: A:Q.94, A:D.131, A:K.134, A:Q.137, A:T.200, A:T.201, A:T.201, A:T.201, A:T.201 Water bridges: A:N.64, A:N.64, A:G.133 Salt bridges: A:H.66

1 x ZN: ZINC ION(Non-covalent)

ZN.2: 5 residues within 4Å: Chain A: H.96, H.98, H.121, T.200 Ligands: 01.1 4 PLIP interactions: 3 interactions with chain A, 1 Ligand-Water interactions Metal complexes: A:H.96, A:H.98, A:H.121, H2O.1

1 x GOL: GLYCEROL(Non-functional Binders)

GOL.3: 5 residues within 4Å: Chain A: Y.9, P.15, D.244, W.246, P.248 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:D.244

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Paloukopoulou, C. et al., Depsides from Origanum dictamnus and Satureja pilosa as selective inhibitors of carbonic anhydrases: Isolation, structure elucidation, X-ray crystallography. Arch Pharm (2025)

Release Date

2025-01-22

Peptides

Carbonic anhydrase 2: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Carbonic anhydrase 2

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