SMTL ID : 9gpy.2 (2 other biounits)

The FK1 domain of FKBP51 in complex with the macrocyclic SAFit analog 12g/j

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.50 Å

Oligo State

monomer

Ligands

1 x 01: 2-cyclohexyl-18,19-dimethoxy-13-methyl-11,17-dioxa-4-aza-1lambda5,18lambda5-diphospha-1,15-distannatetracyclo[13.4.0.04,9.016,20]nonadecane-3,10-quinone

01.1: 19 residues within 4Å: Chain A: Y.45, G.47, K.48, L.49, K.54, F.55, D.56, F.65, Q.73, V.74, I.75, W.78, Y.101, S.106, K.109, I.110, L.116, F.118 Ligands: EDO.2 7 PLIP interactions: 7 interactions with chain A Hydrophobic interactions: A:Y.45, A:D.56, A:F.65, A:F.65, A:W.78, A:W.78 Hydrogen bonds: A:I.75

1 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)

EDO.2: 6 residues within 4Å: Chain A: G.72, Q.73, V.74, I.75, Y.101 Ligands: 01.1 1 PLIP interactions: 1 interactions with chain A Water bridges: A:G.72

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Buffa, V. et al., Conformational Plasticity and Binding Affinity Enhancement Controlled by Linker Derivatization in Macrocycles. Angew.Chem.Int.Ed.Engl. (2025)

Release Date

2025-01-15

Peptides

Peptidyl-prolyl cis-trans isomerase FKBP5: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

Peptidyl-prolyl cis-trans isomerase FKBP5

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