SMTL ID : 9gwz.2 (3 other biounits)

Crystal structure of 23ME-00610 Fab

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.12 Å

Oligo State

hetero-1-1-mer

Ligands

2 x CL: CHLORIDE ION(Non-functional Binders)

CL.1: 5 residues within 4Å: Chain A: R.99, T.102, V.104 Chain B: Y.53, R.54 Ligand excluded by PLIP CL.3: 4 residues within 4Å: Chain A: F.27, S.28, N.31, Y.32 Ligand excluded by PLIP

1 x PO4: PHOSPHATE ION(Non-functional Binders)

PO4.2: 5 residues within 4Å: Chain A: V.92, Q.110, G.111, P.154 Chain B: G.45 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:G.111 Water bridges: A:L.113

1 x MPD: (4S)-2-METHYL-2,4-PENTANEDIOL(Non-functional Binders)

MPD.4: 6 residues within 4Å: Chain A: P.100, L.101, G.103 Chain B: F.36, S.95, N.96 1 PLIP interactions: 1 interactions with chain B Hydrophobic interactions: B:F.36

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Melero, C. et al., CD200R1 immune checkpoint blockade by the first-in-human anti-CD200R1 antibody 23ME-00610: molecular mechanism and engineering of a surrogate antibody. Mabs (2024)

Release Date

2024-10-23

Peptides

23ME-00610 Fab (heavy): A
23ME-00610 Fab (light): B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
AAA

B
BBB

23ME-00610 Fab (heavy)

23ME-00610 Fab (light)

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